RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 PRPF40AO75400 957 aaKnown RBP14.05□□□□□ -0.16
SRSF3-201ENST00000339436 PRPF6O94906 941 aaKnown RBP14.05□□□□□ -0.16
SRSF3-201ENST00000339436 KMT5BQ4FZB7 885 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 EPC2Q52LR7 807 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 TMEM192Q8IY95 271 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 KIAA0895Q8NCT3 520 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 GUCD1Q96NT3 240 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 IKZF4Q9H2S9 585 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 MTMR10Q9NXD2 777 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 PARP2Q9UGN5 583 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 GDAQ9Y2T3 454 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 A0A0B4J269 797 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 FAM189A1O60320 539 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 LAG3P18627 525 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 MATR3P43243 847 aaKnown RBP eCLIP14.05□□□□□ -0.16
SRSF3-201ENST00000339436 SCNN1GP51170 649 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 PNOCQ13519 176 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 BMT2Q1RMZ1 405 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 GSTCDQ8NEC7 633 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 FBXO22Q8NEZ5 403 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 SCFD1Q8WVM8 642 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 CCDC94Q9BW85 323 aaPredicted RBP14.05□□□□□ -0.16
SRSF3-201ENST00000339436 PLVAPQ9BX97 442 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 PRDM12Q9H4Q4 367 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 TMEM206Q9H813 350 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 SLC39A2Q9NP94 309 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 KLK14Q9P0G3 267 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 KANSL3Q9P2N6 904 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 STYXL1Q9Y6J8 313 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 ANKRD63C9JTQ0 380 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 B4GALT3O60512 393 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 RHOBTB3O94955 611 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 POMCP01189 267 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 HOXD13P35453 343 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 BMPR1AP36894 532 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 OSTNP61366 133 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 RNASELQ05823 741 aaKnown RBP14.04□□□□□ -0.16
SRSF3-201ENST00000339436 GRIK3Q13003 919 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 STK4Q13043 487 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 KCNB1Q14721 858 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 SPOUT1Q5T280 376 aaKnown RBP14.04□□□□□ -0.16
SRSF3-201ENST00000339436 ELOA2Q8IYF1 753 aaPredicted RBP14.04□□□□□ -0.16
SRSF3-201ENST00000339436 THNSL1Q8IYQ7 743 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 SYCP3Q8IZU3 236 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 GDPD5Q8WTR4 605 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 CCDC47Q96A33 483 aaKnown RBP14.04□□□□□ -0.16
SRSF3-201ENST00000339436 RPS6KC1Q96S38 1066 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 C11orf84Q9BUA3 381 aaPredicted RBP14.04□□□□□ -0.16
SRSF3-201ENST00000339436 MSTO1Q9BUK6 570 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 AAASQ9NRG9 546 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 TOPORSQ9NS56 1045 aaPredicted RBP14.04□□□□□ -0.16
SRSF3-201ENST00000339436 HOOK1Q9UJC3 728 aaKnown RBP14.04□□□□□ -0.16
SRSF3-201ENST00000339436 PLAGL2Q9UPG8 496 aa14.04□□□□□ -0.16
SRSF3-201ENST00000339436 VWA8A3KMH1 1905 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 XIRP2A4UGR9 3374 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 PTGESO14684 152 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 OGTO15294 1046 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 LPXNO60711 386 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 ZC3H11AO75152 810 aaKnown RBP eCLIP14.03□□□□□ -0.162e-6■■■□□ 15
SRSF3-201ENST00000339436 RB1P06400 928 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 ADSSP30520 456 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 DSC1Q08554 894 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 PSMD2Q13200 908 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 ZBTB41Q5SVQ8 909 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 SLFN12LQ6IEE8 588 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 ZNF507Q8TCN5 953 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 P2RX5Q93086 422 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 SNX27Q96L92 541 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 ACAP3Q96P50 834 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 CDX2Q99626 313 aaPredicted RBP14.03□□□□□ -0.16
SRSF3-201ENST00000339436 CXCL16Q9H2A7 254 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 NRDE2Q9H7Z3 1164 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 UNC80Q8N2C7 3258 aa14.03□□□□□ -0.16
SRSF3-201ENST00000339436 H3BNC9 293 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 RFXAPO00287 272 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 MEFVO15553 781 aaPredicted RBP14.02□□□□□ -0.16
SRSF3-201ENST00000339436 CLTAP09496 248 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 CXCL8P10145 99 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 PBX3P40426 434 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 YARSP54577 528 aaKnown RBP14.02□□□□□ -0.16
SRSF3-201ENST00000339436 KYAT1Q16773 422 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 SEZ6Q53EL9 994 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 XKR4Q5GH76 650 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 KCNT2Q6UVM3 1135 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 ZNF280BQ86YH2 543 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 SPATA20Q8TB22 786 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 POMGNT1Q8WZA1 660 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 ZNF558Q96NG5 402 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 GBP3Q9H0R5 595 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 LMBRD1Q9NUN5 540 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 MIOSQ9NXC5 875 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 DNAJB4Q9UDY4 337 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 PCDHB12Q9Y5F1 795 aa14.02□□□□□ -0.16
SRSF3-201ENST00000339436 SCN1AP35498 2009 aa14.02□□□□□ -0.17
SRSF3-201ENST00000339436 CARNS1A5YM72 827 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 DDHD2O94830 711 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 SMC2O95347 1197 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 GARTP22102 1010 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 PPM1AP35813 382 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms