RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 MAPK8IP1Q9UQF2 711 aa18.27■□□□□ 0.52
SFN-201ENST00000339276 GIT1Q9Y2X7 761 aa18.27■□□□□ 0.52
SFN-201ENST00000339276 CHD9Q3L8U1 2897 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 ARL5CA6NH57 179 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 OGTO15294 1046 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 TGFB1I1O43294 461 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 LINC00271P0C7V0 271 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 TNFSF9P41273 254 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 FXR1P51114 621 aaKnown RBP eCLIP18.26■□□□□ 0.51
SFN-201ENST00000339276 KNOP1Q1ED39 458 aaKnown RBP18.26■□□□□ 0.51
SFN-201ENST00000339276 ZNF658Q5TYW1 1059 aaPredicted RBP18.26■□□□□ 0.51
SFN-201ENST00000339276 LRRC43Q8N309 656 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 CBWD1Q9BRT8 395 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 TYW1Q9NV66 732 aaKnown RBP18.26■□□□□ 0.51
SFN-201ENST00000339276 TBC1D13Q9NVG8 400 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 RALGAPA2Q2PPJ7 1873 aa18.26■□□□□ 0.51
SFN-201ENST00000339276 BIN1O00499 593 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 INPPL1O15357 1258 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 MEFVO15553 781 aaPredicted RBP18.25■□□□□ 0.51
SFN-201ENST00000339276 MBD3O95983 291 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 POMCP01189 267 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 SCNN1GP51170 649 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 ARMCX5Q6P1M9 558 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 GSTCDQ8NEC7 633 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 ZSWIM2Q8NEG5 633 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 URGCPQ8TCY9 931 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 ACAP3Q96P50 834 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 C17orf80Q9BSJ5 609 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 MRPL9Q9BYD2 267 aaKnown RBP18.25■□□□□ 0.51
SFN-201ENST00000339276 CWH43Q9H720 699 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 AGPAT3Q9NRZ7 376 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 MIOSQ9NXC5 875 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 AGO2Q9UKV8 859 aaKnown RBP18.25■□□□□ 0.51
SFN-201ENST00000339276 MTUS1Q9ULD2 1270 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 TDRD15B5MCY1 1934 aaKnown RBP18.25■□□□□ 0.51
SFN-201ENST00000339276 CITO14578 2027 aa18.25■□□□□ 0.51
SFN-201ENST00000339276 TRIP11Q15643 1979 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 CLIC2O15247 247 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 B4GALT3O60512 393 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 CXCL8P10145 99 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 GARTP22102 1010 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 YARSP54577 528 aaKnown RBP18.24■□□□□ 0.51
SFN-201ENST00000339276 GUF1Q8N442 669 aaKnown RBP18.24■□□□□ 0.51
SFN-201ENST00000339276 RSPH1Q8WYR4 309 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 SAAL1Q96ER3 474 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 SNX27Q96L92 541 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 RPS6KC1Q96S38 1066 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 TTYH1Q9H313 450 aaPredicted RBP18.24■□□□□ 0.51
SFN-201ENST00000339276 KCTD10Q9H3F6 313 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 PCIF1Q9H4Z3 704 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 CERS4Q9HA82 394 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 KIAA1468Q9P260 1216 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 PLAGL2Q9UPG8 496 aa18.24■□□□□ 0.51
SFN-201ENST00000339276 PTGESO14684 152 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 CLTAP09496 248 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 BMP6P22004 513 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 ACOT2P49753 483 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 MORC3Q14149 939 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 GLRA4Q5JXX5 417 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 SPOUT1Q5T280 376 aaKnown RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 HS2ST1Q7LGA3 356 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 ZNF280BQ86YH2 543 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 CLP1Q92989 425 aaKnown RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 TGS1Q96RS0 853 aaKnown RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 ZNF576Q9H609 170 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 TOPORSQ9NS56 1045 aaPredicted RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 CPSF3Q9UKF6 684 aaKnown RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 PDCD11Q14690 1871 aaKnown RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 CHD7Q9P2D1 2997 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 TMEM265A0A087WTH1 108 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 GOLGA8IPA6NC78 632 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 GOLGA8JA6NMD2 632 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 DDHD2O94830 711 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 KIF20AO95235 890 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 CTNNB1P35222 781 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 PBX3P40426 434 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 PRCPP42785 496 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 ERVK-21P61565 698 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 RNASELQ05823 741 aaKnown RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 ENOX2Q16206 610 aaKnown RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 SLC10A6Q3KNW5 377 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 ZNF697Q5TEC3 545 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 CRELD2Q6UXH1 353 aaPredicted RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 NOC3LQ8WTT2 800 aaKnown RBP18.23■□□□□ 0.51
SFN-201ENST00000339276 FAM213AQ9BRX8 229 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 NRDE2Q9H7Z3 1164 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 HSPBP1Q9NZL4 362 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 KANSL3Q9P2N6 904 aa18.23■□□□□ 0.51
SFN-201ENST00000339276 COL4A4P53420 1690 aaPredicted RBP18.22■□□□□ 0.51
SFN-201ENST00000339276 ANK1P16157 1881 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 ZC3H11AO75152 810 aaKnown RBP eCLIP18.22■□□□□ 0.51
SFN-201ENST00000339276 CYP2J2P51589 502 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 SNRPFP62306 86 aaKnown RBP18.22■□□□□ 0.51
SFN-201ENST00000339276 GRIK3Q13003 919 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 KYAT1Q16773 422 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 EPC2Q52LR7 807 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 COBLL1Q53SF7 1204 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 XKR4Q5GH76 650 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 ALKAL1Q6UXT8 129 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 COLGALT1Q8NBJ5 622 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms