RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ANLNQ9NQW6 1124 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 MYBP10242 640 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
RTN4-202ENST00000337526 ITIH2P19823 946 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 SSTR3P32745 418 aaPredicted RBP14.58□□□□□ -0.08
RTN4-202ENST00000337526 PHKA2P46019 1235 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 RHPN2Q8IUC4 686 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 SP8Q8IXZ3 490 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 XPO6Q96QU8 1125 aaKnown RBP14.58□□□□□ -0.08
RTN4-202ENST00000337526 WRNIP1Q96S55 665 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 MAP3K14Q99558 947 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 DBR1Q9UK59 544 aaKnown RBP14.58□□□□□ -0.08
RTN4-202ENST00000337526 ALG6Q9Y672 507 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 ZBTB22O15209 634 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 FOXP2O15409 715 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 SETSIPP0DME0 302 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 DEUP1Q05D60 604 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 SMIM5Q71RC9 77 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 MRPL4Q9BYD3 311 aaKnown RBP14.58□□□□□ -0.08
RTN4-202ENST00000337526 BFARQ9NZS9 450 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 ORC6Q9Y5N6 252 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 CPS1P31327 1500 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 CCDC195A0A1B0GUA6 201 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 ARHGEF37A1IGU5 675 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 TYW5A2RUC4 315 aaKnown RBP14.57□□□□□ -0.08
RTN4-202ENST00000337526 PLEKP08567 350 aaPredicted RBP14.57□□□□□ -0.08
RTN4-202ENST00000337526 LONRF1Q17RB8 773 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 JAMLQ86YT9 394 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 CHEK2O96017 543 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 STMN1P16949 149 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 ROR1Q01973 937 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 ACAD11Q709F0 780 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 CCNYL1Q8N7R7 359 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 ALG13Q9NP73 1137 aaKnown RBP14.57□□□□□ -0.08
RTN4-202ENST00000337526 CAMTA2O94983 1202 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 TAC1P20366 129 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 SMARCA1P28370 1054 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 LCA5Q86VQ0 697 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 TBC1D16Q8TBP0 767 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 EXT2Q93063 718 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.57□□□□□ -0.086e-7■□□□□ 11.1
RTN4-202ENST00000337526 ERP44Q9BS26 406 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 CELF4Q9BZC1 486 aaKnown RBP14.57□□□□□ -0.08
RTN4-202ENST00000337526 ISCUQ9H1K1 167 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 C2orf40Q9H1Z8 148 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 L1RE1Q9UN81 338 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 USP15Q9Y4E8 981 aaPredicted RBP14.57□□□□□ -0.08
RTN4-202ENST00000337526 JCADQ9P266 1359 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 EIF4E1BA6NMX2 242 aaKnown RBP14.57□□□□□ -0.08
RTN4-202ENST00000337526 RPA1P27694 616 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 ZC2HC1CQ53FD0 456 aaPredicted RBP14.57□□□□□ -0.08
RTN4-202ENST00000337526 C16orf86Q6ZW13 317 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 SYDE1Q6ZW31 735 aaPredicted RBP14.57□□□□□ -0.08
RTN4-202ENST00000337526 FBXO33Q7Z6M2 555 aa14.57□□□□□ -0.08
RTN4-202ENST00000337526 GOLGA8RI6L899 631 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 HUS1O60921 280 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 TYK2P29597 1187 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 IREB2P48200 963 aaKnown RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 TOB1P50616 345 aaPredicted RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.082e-7■□□□□ 9.1
RTN4-202ENST00000337526 AGBL2Q5U5Z8 902 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 ANKMY2Q8IV38 441 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 DUSP10Q9Y6W6 482 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 PITPNM2Q9BZ72 1349 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 GSTA4O15217 222 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 DNAJC8O75937 253 aaPredicted RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 TMEM253P0C7T8 217 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 KCNJ1P48048 391 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 KLHDC7AQ5VTJ3 777 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 SYN2Q92777 582 aaPredicted RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 SEC16BQ96JE7 1060 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 DHX35Q9H5Z1 703 aaKnown RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 CYP4F11Q9HBI6 524 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 FAM217BQ9NTX9 383 aaPredicted RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 EHD2Q9NZN4 543 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 ARPP19P56211 112 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 TAP1Q03518 808 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 WDR93Q6P2C0 686 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 CPA5Q8WXQ8 436 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 ABTB1Q969K4 478 aaPredicted RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 IL17RAQ96F46 866 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 STAP1Q9ULZ2 295 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 A0A087X0T9 212 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 CREB3O43889 395 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 CCDC22O60826 627 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 FAM228BP0C875 321 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 PAMP19021 973 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 COMTP21964 271 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 AP2B1P63010 937 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 KYNUQ16719 465 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 KIF19Q2TAC6 998 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 NYAP2Q9P242 653 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 SUN2Q9UH99 717 aa14.56□□□□□ -0.08
RTN4-202ENST00000337526 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.56□□□□□ -0.082e-6■□□□□ 10
RTN4-202ENST00000337526 SMG5Q9UPR3 1016 aaKnown RBP14.56□□□□□ -0.08
RTN4-202ENST00000337526 FAM107AO95990 144 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 FDX1P10109 184 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 MORF4L2Q15014 288 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms