RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TRIB2Q92519 343 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 CACNG4Q9UBN1 327 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 PACSIN2Q9UNF0 486 aaPredicted RBP17.12■□□□□ 0.33
PDGFB-201ENST00000331163 MCM3APO60318 1980 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 ADCY6O43306 1168 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 STX10O60499 249 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
PDGFB-201ENST00000331163 KIF11P52732 1056 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 SLC30A5Q8TAD4 765 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 LMBR1Q8WVP7 490 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 APBA2Q99767 749 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 RGPD3A6NKT7 1758 aaPredicted RBP17.11■□□□□ 0.33
PDGFB-201ENST00000331163 RGPD4Q7Z3J3 1758 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 KRT86O43790 486 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 ZMYND10O75800 440 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 MMP3P08254 477 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 SMIM10L2AP0DMW4 78 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 SMIM10L2BP0DMW5 78 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 YARSP54577 528 aaKnown RBP17.11■□□□□ 0.33
PDGFB-201ENST00000331163 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
PDGFB-201ENST00000331163 TTC31Q49AM3 519 aaPredicted RBP17.11■□□□□ 0.33
PDGFB-201ENST00000331163 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 SHCBP1Q8NEM2 672 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 TATDN2Q93075 761 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 SLC35C1Q96A29 364 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 MRFAP1Q9Y605 127 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 TNNC2P02585 160 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 CPT1AP50416 773 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 EDRF1Q3B7T1 1238 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 TAPT1Q6NXT6 567 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 RDM1Q8NG50 284 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 DEFB118Q96PH6 123 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 PPP1R12CQ9BZL4 782 aa17.11■□□□□ 0.33
PDGFB-201ENST00000331163 MOCS3O95396 460 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 FTCDO95954 541 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 TRIM14Q14142 442 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 IQSEC1Q6DN90 963 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 CTTNBP2NLQ9P2B4 639 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 ERLIN1O75477 346 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 KRT83P78385 493 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 GRB14Q14449 540 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 TRIM59Q8IWR1 403 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 SLC35F6Q8N357 371 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 SAMD3Q8N6K7 520 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 GLT1D1Q96MS3 346 aa17.1■□□□□ 0.33
PDGFB-201ENST00000331163 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
PDGFB-201ENST00000331163 ATMINO43313 823 aaPredicted RBP17.09■□□□□ 0.33
PDGFB-201ENST00000331163 SRGAP2O75044 1071 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 NBPF20Q3BBV1 942 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 PNKPQ96T60 521 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 KCND2Q9NZV8 630 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 MAFBQ9Y5Q3 323 aaPredicted RBP17.09■□□□□ 0.33
PDGFB-201ENST00000331163 PON1P27169 355 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 NAA35Q5VZE5 725 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 SV2AQ7L0J3 742 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 TMEM192Q8IY95 271 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 FGD4Q96M96 766 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 NFASCO94856 1347 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 SIPA1L1O43166 1804 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 H0YCG3 227 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 PSEN2P49810 448 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 APLP1P51693 650 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 DNAJC21Q5F1R6 531 aaKnown RBP17.09■□□□□ 0.33
PDGFB-201ENST00000331163 MICALL1Q8N3F8 863 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 SOCS4Q8WXH5 440 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 CDHR5Q9HBB8 845 aa17.09■□□□□ 0.33
PDGFB-201ENST00000331163 C17orf102A2RUQ5 167 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 ALDH1A1P00352 501 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 ASGR1P07306 291 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 RFC5P40937 340 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 NAMPTP43490 491 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 KRT39Q6A163 491 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 HDXQ7Z353 690 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 FRMD5Q7Z6J6 570 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 SNTG2Q9NY99 539 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 NUB1Q9Y5A7 615 aa17.08■□□□□ 0.33
PDGFB-201ENST00000331163 FOXN3O00409 490 aaPredicted RBP17.08■□□□□ 0.32
PDGFB-201ENST00000331163 IQCEQ6IPM2 695 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 EXOC4Q96A65 974 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 SYNJ2BP-COX16A0A087WUM0 186 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 GOLGA8SH3BPF8 625 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 EIF3DO15371 548 aaKnown RBP eCLIP17.08■□□□□ 0.32
PDGFB-201ENST00000331163 THAP12O43422 761 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 RAP1GAPP47736 663 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 ARPP19P56211 112 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 CCDC62Q6P9F0 684 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 C17orf99Q6UX52 265 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 DEFB128Q7Z7B8 93 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 FBXL13Q8NEE6 735 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 OR5B17Q8NGF7 314 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 CTNNBL1Q8WYA6 563 aaPredicted RBP17.08■□□□□ 0.32
PDGFB-201ENST00000331163 RPS6KC1Q96S38 1066 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 COX16Q9P0S2 106 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 AGAP1Q9UPQ3 857 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 PCDHA2Q9Y5H9 948 aa17.08■□□□□ 0.32
PDGFB-201ENST00000331163 TUBB4AP04350 444 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 ADSSP30520 456 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 CDH8P55286 799 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms