RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 KCNH7Q9NS40 1196 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 NOCTQ9UK39 431 aaKnown RBP21.29■■□□□ 1
CRLF3-201ENST00000324238 RTN2O75298 545 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 KRT17Q04695 432 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 HAUS6Q7Z4H7 955 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 PGM2Q96G03 612 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 SAMD15Q9P1V8 674 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 TRIM33Q9UPN9 1127 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 KCNJ2P63252 427 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 RASA3Q14644 834 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 SIX1Q15475 284 aaPredicted RBP21.28■■□□□ 1
CRLF3-201ENST00000324238 FAM102BQ5T8I3 360 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 MRRFQ96E11 262 aaKnown RBP21.28■■□□□ 1
CRLF3-201ENST00000324238 AAASQ9NRG9 546 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 CCPG1Q9ULG6 757 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 ELF3P78545 371 aaPredicted RBP21.28■■□□□ 1
CRLF3-201ENST00000324238 CETN1Q12798 172 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 MPP2Q14168 576 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 CNGA2Q16280 664 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 XXYLT1Q8NBI6 393 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 TAS1R2Q8TE23 839 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 CPA5Q8WXQ8 436 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 ARHGEF2Q92974 986 aaKnown RBP21.28■■□□□ 1
CRLF3-201ENST00000324238 THSD7AQ9UPZ6 1657 aa21.28■■□□□ 1
CRLF3-201ENST00000324238 SRRM3A6NNA2 597 aaPredicted RBP21.27■■□□□ 1
CRLF3-201ENST00000324238 PIK3CDO00329 1044 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 UBOX5O94941 541 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 SGO2Q562F6 1265 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 C6orf118Q5T5N4 469 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 INTS8Q75QN2 995 aaKnown RBP21.27■■□□□ 1
CRLF3-201ENST00000324238 CYP4X1Q8N118 509 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 PCYOX1Q9UHG3 505 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 R3HDM2Q9Y2K5 976 aaKnown RBP21.27■■□□□ 1
CRLF3-201ENST00000324238 DIS3Q9Y2L1 958 aaKnown RBP21.27■■□□□ 1
CRLF3-201ENST00000324238 TMEM120BA0PK00 339 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 GJB6O95452 261 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 CALCOCO2Q13137 446 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 NUGGCQ68CJ6 796 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 CAPN12Q6ZSI9 719 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 ANKS4BQ8N8V4 417 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 PRCCQ92733 491 aaPredicted RBP21.27■■□□□ 1
CRLF3-201ENST00000324238 RAVER2Q9HCJ3 691 aaKnown RBP21.27■■□□□ 1
CRLF3-201ENST00000324238 LARSQ9P2J5 1176 aaKnown RBP21.27■■□□□ 1
CRLF3-201ENST00000324238 PNMA3Q9UL41 463 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 FZD1Q9UP38 647 aa21.27■■□□□ 1
CRLF3-201ENST00000324238 A8MUI8 341 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 MIF4GDA9UHW6 222 aaKnown RBP21.27■□□□□ 0.99
CRLF3-201ENST00000324238 TP73O15350 636 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 PLCB4Q15147 1175 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 C11orf63Q6NUN7 778 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 BTNL9Q6UXG8 535 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 LARGE2Q8N3Y3 721 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 AKT1S1Q96B36 256 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 ZNF341Q9BYN7 854 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 KLHL11Q9NVR0 708 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 SEL1LQ9UBV2 794 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 ZNF70Q9UC06 446 aaPredicted RBP21.27■□□□□ 0.99
CRLF3-201ENST00000324238 ODF2LQ9ULJ1 636 aa21.27■□□□□ 0.99
CRLF3-201ENST00000324238 ECEL1O95672 775 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 VIL1P09327 827 aaKnown RBP21.26■□□□□ 0.99
CRLF3-201ENST00000324238 CYP11B1P15538 503 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 GSCP56915 257 aaPredicted RBP21.26■□□□□ 0.99
CRLF3-201ENST00000324238 DRP2Q13474 957 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 CCDC63Q8NA47 563 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 GIMAP7Q8NHV1 300 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 N4BP2L2Q92802 583 aaPredicted RBP21.26■□□□□ 0.99
CRLF3-201ENST00000324238 CD101Q93033 1021 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 YY1AP1Q9H869 796 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 ANAPC7Q9UJX3 599 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 TMX2Q9Y320 296 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 SIPA1L1O43166 1804 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 ADSSP30520 456 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 SSR1P43307 286 aaKnown RBP21.26■□□□□ 0.99
CRLF3-201ENST00000324238 ADCY2Q08462 1091 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 TRPM8Q7Z2W7 1104 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 PIGWQ7Z7B1 504 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 OGFOD1Q8N543 542 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 C9orf72Q96LT7 481 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 PAIP2Q9BPZ3 127 aaKnown RBP21.26■□□□□ 0.99
CRLF3-201ENST00000324238 STRA6Q9BX79 667 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 MTUS1Q9ULD2 1270 aa21.26■□□□□ 0.99
CRLF3-201ENST00000324238 PODXLO00592 558 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 RARRES1P49788 294 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 FAM182AQ5T1J6 154 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 PASD1Q8IV76 773 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 ART4Q93070 314 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 STK38LQ9Y2H1 464 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 SPDYE2BA6NHP3 402 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 AGTP01019 485 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 SPDYE6P0CI01 402 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 CETPP11597 493 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 RARGP13631 454 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 CDC25CP30307 473 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 XRCC4Q13426 336 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 LACTB2Q53H82 288 aaPredicted RBP21.25■□□□□ 0.99
CRLF3-201ENST00000324238 FAM71AQ8IYT1 594 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 ACCSQ96QU6 501 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 KDM4CQ9H3R0 1056 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 GEMIN8Q9NWZ8 242 aaKnown RBP21.25■□□□□ 0.99
CRLF3-201ENST00000324238 STK24Q9Y6E0 443 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms