RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 EVI5O60447 810 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 HSF2BPO75031 334 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 HEXIM1O94992 359 aaKnown RBP15.32■□□□□ 0.04
VRK3-201ENST00000316763 PRMT2P55345 433 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 BFSP1Q12934 665 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
VRK3-201ENST00000316763 ZSCAN26Q16670 478 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 HSDL1Q3SXM5 330 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 PEX26Q7Z412 305 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 LRRC57Q8N9N7 239 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 RAET1EQ8TD07 263 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 ZBTB9Q96C00 473 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 KRT12Q99456 494 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 HINFPQ9BQA5 517 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 SH2D3AQ9BRG2 576 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 IKZF4Q9H2S9 585 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 PDLIM7Q9NR12 457 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 APEX2Q9UBZ4 518 aa15.32■□□□□ 0.04
VRK3-201ENST00000316763 GOLGA8KD6RF30 607 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 ADCY3O60266 1144 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 LGR5O75473 907 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 ELNP15502 786 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 TCF7P36402 384 aaPredicted RBP15.31■□□□□ 0.04
VRK3-201ENST00000316763 PRAMEF19Q5SWL8 479 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 TMEM63BQ5T3F8 832 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 INTS8Q75QN2 995 aaKnown RBP15.31■□□□□ 0.04
VRK3-201ENST00000316763 DHX37Q8IY37 1157 aaKnown RBP15.31■□□□□ 0.04
VRK3-201ENST00000316763 ACTRT1Q8TDG2 376 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 CEP170P1Q96L14 293 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 NIFKQ9BYG3 293 aaKnown RBP15.31■□□□□ 0.04
VRK3-201ENST00000316763 ABHD16BQ9H3Z7 469 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 CYP26B1Q9NR63 512 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 SUCLA2Q9P2R7 463 aaPredicted RBP15.31■□□□□ 0.04
VRK3-201ENST00000316763 CEP104O60308 925 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 OATP04181 439 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 IVLP07476 585 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 STAT5BP51692 787 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 SNRPFP62306 86 aaKnown RBP15.31■□□□□ 0.04
VRK3-201ENST00000316763 MRPS25P82663 173 aaKnown RBP15.31■□□□□ 0.04
VRK3-201ENST00000316763 GUCY2DQ02846 1103 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 ARHGAP1Q07960 439 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 FAM160B1Q5W0V3 765 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 SLC17A8Q8NDX2 589 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 SLC30A5Q8TAD4 765 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 TMEM174Q8WUU8 243 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.31■□□□□ 0.04
VRK3-201ENST00000316763 COPS5Q92905 334 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 EMID1Q96A84 441 aaPredicted RBP15.31■□□□□ 0.04
VRK3-201ENST00000316763 CALR3Q96L12 384 aaKnown RBP15.31■□□□□ 0.04
VRK3-201ENST00000316763 SPATA33Q96N06 139 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 EPB41L5Q9HCM4 733 aa15.31■□□□□ 0.04
VRK3-201ENST00000316763 TMCO5BA8MYB1 307 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 AGPSO00116 658 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 PGRMC1O00264 195 aaKnown RBP15.3■□□□□ 0.04
VRK3-201ENST00000316763 NOP56O00567 594 aaKnown RBP15.3■□□□□ 0.04
VRK3-201ENST00000316763 P4HA2O15460 535 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 DGAT1O75907 488 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 TMEM253P0C7T8 217 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 TRIM49P0CI25 452 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 TRIM49CP0CI26 452 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 PLS3P13797 630 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 TNFAIP3P21580 790 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 GALCP54803 685 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 TRIM32Q13049 653 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 PPFIA1Q13136 1202 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 ACVR2BQ13705 512 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 LAMC2Q13753 1193 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 CBWD6Q4V339 395 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 CBWD3Q5JTY5 395 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 CBWD5Q5RIA9 395 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 TRMT1LQ7Z2T5 733 aaKnown RBP15.3■□□□□ 0.04
VRK3-201ENST00000316763 SLFN11Q7Z7L1 901 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 C12orf56Q8IXR9 622 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 FAM76AQ8TAV0 307 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 PXYLP1Q8TE99 480 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 CEP89Q96ST8 783 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 SEPT9Q9UHD8 586 aaPredicted RBP15.3■□□□□ 0.04
VRK3-201ENST00000316763 TMEM59LQ9UK28 342 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 PTPN22Q9Y2R2 807 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 PTCH2Q9Y6C5 1203 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 WDR81Q562E7 1941 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
VRK3-201ENST00000316763 GOLGA6CA6NDK9 693 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 RPS6KA5O75582 802 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 GLI1P08151 1106 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 GOLGA6DP0CG33 693 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 RNASE9P60153 205 aaKnown RBP15.29■□□□□ 0.04
VRK3-201ENST00000316763 MFSD14CQ5VZR4 134 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 PLPPR4Q7Z2D5 763 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 DAAM2Q86T65 1068 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 WHAMMQ8TF30 809 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 IFT81Q8WYA0 676 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 CTNNBL1Q8WYA6 563 aaPredicted RBP15.29■□□□□ 0.04
VRK3-201ENST00000316763 GOLGA6AQ9NYA3 693 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 AMFRQ9UKV5 643 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 NCANO14594 1321 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 CCDC188H7C350 402 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 MAPK13O15264 365 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 GH1P01241 217 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 ADCYAP1R1P41586 468 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms