RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 PLTPP55058 493 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 EN1Q05925 392 aaPredicted RBP16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 BAATQ14032 418 aaPredicted RBP16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 TTC31Q49AM3 519 aaPredicted RBP16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 UBAP2Q5T6F2 1119 aaKnown RBP16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 SLC13A5Q86YT5 568 aaPredicted RBP16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 RDM1Q8NG50 284 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 FBXO25Q8TCJ0 367 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 SPIRE2Q8WWL2 714 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 TATDN2Q93075 761 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 RNF25Q96BH1 459 aaPredicted RBP16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 ATG4CQ96DT6 458 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 FAM84AQ96KN4 292 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 NT5C1BQ96P26 610 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 SENP7Q9BQF6 1050 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 GTF3C4Q9UKN8 822 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 RIPK3Q9Y572 518 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 ADGRA3Q8IWK6 1321 aa16.35■□□□□ 0.21
SPIRE1-201ENST00000309836 E7EVH7 732 aa16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 FAM107AO95990 144 aa16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 SMTNP53814 917 aa16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 PMS2P54278 862 aa16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 EIF3BP55884 814 aaKnown RBP16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 CYP1B1Q16678 543 aa16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 PPANQ9NQ55 473 aaKnown RBP16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 RNF146Q9NTX7 359 aa16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 RAB20Q9NX57 234 aa16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 CTDP1Q9Y5B0 961 aaPredicted RBP16.34■□□□□ 0.21
SPIRE1-201ENST00000309836 VWA5AO00534 786 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 CTNND1O60716 968 aaKnown RBP16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 PAEPP09466 180 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 NUDT17P0C025 328 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 RARAP10276 462 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 CLEC16AQ2KHT3 1053 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 VSIG10LQ86VR7 867 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 SPATS2Q86XZ4 545 aaKnown RBP16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 FBXL13Q8NEE6 735 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 PSPC1Q8WXF1 523 aaKnown RBP16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 KIFAP3Q92845 792 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 NTPCRQ9BSD7 190 aaKnown RBP16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 GABBR1Q9UBS5 961 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 PCDHA10Q9Y5I2 948 aa16.33■□□□□ 0.21
SPIRE1-201ENST00000309836 TRAPPC3O43617 180 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 SPOPO43791 374 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 CAND2O75155 1236 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 ERLIN2O94905 339 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 CCND2P30279 289 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 GTF2H1P32780 548 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 COILP38432 576 aaPredicted RBP16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 PDE6CP51160 858 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 IFFO1Q0D2I5 559 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 ACAD10Q6JQN1 1059 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 CCDC137Q6PK04 289 aaKnown RBP16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 SV2AQ7L0J3 742 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 TAS1R3Q7RTX0 852 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 MICALL1Q8N3F8 863 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 CEP170P1Q96L14 293 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 PABPC3Q9H361 631 aaKnown RBP16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 XPNPEP1Q9NQW7 623 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 PDLIM7Q9NR12 457 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 GINM1Q9NU53 330 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 UVRAGQ9P2Y5 699 aa16.33■□□□□ 0.2
SPIRE1-201ENST00000309836 NR3C2P08235 984 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 KCNA2P16389 499 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 ODF2Q5BJF6 829 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 XRRA1Q6P2D8 792 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 NLRX1Q86UT6 975 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 C12orf50Q8NA57 414 aaPredicted RBP16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 REPS2Q8NFH8 660 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 POMGNT1Q8WZA1 660 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 RAPGEF5Q92565 580 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 GPRASP2Q96D09 838 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 CYFIP2Q96F07 1278 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 PI4K2AQ9BTU6 479 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 RLFQ13129 1914 aa16.32■□□□□ 0.2
SPIRE1-201ENST00000309836 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 DOCK5Q9H7D0 1870 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 GMNCA6NCL1 334 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 PODXLO00592 558 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 MEFVO15553 781 aaPredicted RBP16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 RGS20O76081 388 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 DLATP10515 647 aaKnown RBP16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 ZNF280AP59817 542 aaPredicted RBP16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 GPD1LQ8N335 351 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 KAT2BQ92831 832 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 PNMA2Q9UL42 364 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 QPCTQ16769 361 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 DENND2CQ68D51 928 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 OTUD6AQ7L8S5 288 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 HOOK3Q86VS8 718 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 ZNF516Q92618 1163 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 GGA2Q9UJY4 613 aa16.31■□□□□ 0.2
SPIRE1-201ENST00000309836 KIAA1217Q5T5P2 1943 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 KRT5P13647 590 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 GARTP22102 1010 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 GBP1P32455 592 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 KCNJ1P48048 391 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms