RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 POSTNQ15063 836 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PTPROQ16827 1216 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SPRED2Q7Z698 418 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 MYLIPQ8WY64 445 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 POMGNT1Q8WZA1 660 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 P2RX5Q93086 422 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ZBTB45Q96K62 511 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GUCD1Q96NT3 240 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ACAP3Q96P50 834 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CDX2Q99626 313 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 MSTO1Q9BUK6 570 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CWH43Q9H720 699 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PTPRHQ9HD43 1115 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KLK14Q9P0G3 267 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 HCSTQ9UBK5 93 aa12.02□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 EPOPA6NHQ4 379 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 OGTO15294 1046 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GADD45BO75293 160 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PRPF6O94906 941 aaKnown RBP12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KIF20AO95235 890 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 THP07101 528 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PSMD2Q13200 908 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KMT5BQ4FZB7 885 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KCNT2Q6UVM3 1135 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CEP120Q8N960 986 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 HPS3Q969F9 1004 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ZFP42Q96MM3 310 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TIGD1Q96MW7 591 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SLC39A2Q9NP94 309 aa12.01□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 H3BNC9 293 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 RFXAPO00287 272 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ABLIM1O14639 778 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 INPPL1O15357 1258 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KLRC4O43908 158 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PRPF40AO75400 957 aaKnown RBP12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SMC2O95347 1197 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 LINC00271P0C7V0 271 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 OR1G1P47890 313 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 BCAR1P56945 870 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KRT17Q04695 432 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PPP2R3AQ06190 1150 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 EHHADHQ08426 723 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 DPYDQ12882 1025 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PNOCQ13519 176 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SNW1Q13573 536 aaKnown RBP12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ARMCX5Q6P1M9 558 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 LRRC55Q6ZSA7 311 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 NELFCDQ8IXH7 590 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 MICALL1Q8N3F8 863 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KLHL23Q8NBE8 558 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ENGASEQ8NFI3 743 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 NOC3LQ8WTT2 800 aaKnown RBP12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TMEM169Q96HH4 297 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SNX27Q96L92 541 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TMEM175Q9BSA9 504 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 STRA6Q9BX79 667 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 FGFBP2Q9BYJ0 223 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 LMAN2LQ9H0V9 348 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 NRDE2Q9H7Z3 1164 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 RPF1Q9H9Y2 349 aaKnown RBP12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 RMND1Q9NWS8 449 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SPG21Q9NZD8 308 aa12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 AGO2Q9UKV8 859 aaKnown RBP12□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 A0A0B4J269 797 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KIAA0391O15091 583 aaKnown RBP11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 FGF18O76093 207 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CSPG5O95196 566 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 LDHAP00338 332 aaKnown RBP11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CLTAP09496 248 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GARTP22102 1010 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PBX3P40426 434 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 UBE3AQ05086 875 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KCNA1Q09470 495 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 HSP90AA2PQ14568 343 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 BMS1Q14692 1282 aaKnown RBP11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KCNB1Q14721 858 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SEZ6Q53EL9 994 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TIGD5Q53EQ6 642 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GLRA4Q5JXX5 417 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SLC39A4Q6P5W5 647 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CLEC17AQ6ZS10 378 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 HS2ST1Q7LGA3 356 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GLIS3Q8NEA6 775 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SMARCE1Q969G3 411 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SLC38A7Q9NVC3 462 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 DNAJB4Q9UDY4 337 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PUF60Q9UHX1 559 aaKnown RBP11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 FAN1Q9Y2M0 1017 aa11.99□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TISP43B9A030 160 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 NT5C1B-RDH14C9J2C7 533 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ANKRD63C9JTQ0 380 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TULP1O00294 542 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 XPOTO43592 962 aaKnown RBP11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 DDHD2O94830 711 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 RHOBTB3O94955 611 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ALDH2P05091 517 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ITGB1P05556 798 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GALTP07902 379 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CXCL8P10145 99 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms