RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 C1orf54Q8WWF1 131 aa14.42□□□□□ -0.1
CTDP1-202ENST00000299543 NUP85Q9BW27 656 aa14.42□□□□□ -0.1
CTDP1-202ENST00000299543 ZNF277Q9NRM2 450 aaPredicted RBP14.42□□□□□ -0.1
CTDP1-202ENST00000299543 HERC5Q9UII4 1024 aaKnown RBP14.42□□□□□ -0.1
CTDP1-202ENST00000299543 ZNF831Q5JPB2 1677 aa14.42□□□□□ -0.1
CTDP1-202ENST00000299543 SPATA31A6Q5VVP1 1343 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 ANKRD33BA6NCL7 494 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 MTMR1Q13613 665 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 NEK9Q8TD19 979 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 PLEKHO2Q8TD55 490 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.41□□□□□ -0.19e-10■■■■■ 79.8
CTDP1-202ENST00000299543 FAM118BQ9BPY3 351 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 TMEM117Q9H0C3 514 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 DBR1Q9UK59 544 aaKnown RBP14.41□□□□□ -0.1
CTDP1-202ENST00000299543 NENFQ9UMX5 172 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 RPS6KL1Q9Y6S9 549 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 RARRES1P49788 294 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 RPS6KA3P51812 740 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 ZNF131P52739 623 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 ELF3P78545 371 aaPredicted RBP14.41□□□□□ -0.1
CTDP1-202ENST00000299543 IFI35P80217 286 aaPredicted RBP14.41□□□□□ -0.1
CTDP1-202ENST00000299543 ADCY1Q08828 1119 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 SLC15A2Q16348 729 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 ZNF513Q8N8E2 541 aaPredicted RBP14.41□□□□□ -0.1
CTDP1-202ENST00000299543 ATP8B4Q8TF62 1192 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 BICD1Q96G01 975 aa14.41□□□□□ -0.1
CTDP1-202ENST00000299543 VIMP08670 466 aaKnown RBP14.4□□□□□ -0.1
CTDP1-202ENST00000299543 YWHABP31946 246 aaKnown RBP14.4□□□□□ -0.1
CTDP1-202ENST00000299543 RPL21P46778 160 aaKnown RBP14.4□□□□□ -0.1
CTDP1-202ENST00000299543 QARSP47897 775 aaKnown RBP14.4□□□□□ -0.1
CTDP1-202ENST00000299543 PRELID2Q8N945 189 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 ZNF564Q8TBZ8 553 aaPredicted RBP14.4□□□□□ -0.1
CTDP1-202ENST00000299543 MRIQ9BWK5 157 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 TMEM206Q9H813 350 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 MLXIPLQ9NP71 852 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 LTBP4Q8N2S1 1624 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 SPDYE2BA6NHP3 402 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 ACSL3O95573 720 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 SPDYE6P0CI01 402 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 UGCGQ16739 394 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 DAB2IPQ5VWQ8 1189 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 CACNA2D3Q8IZS8 1091 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 OLIG1Q8TAK6 271 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 LMO3Q8TAP4 145 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 MTRF1LQ9UGC7 380 aaKnown RBP14.4□□□□□ -0.1
CTDP1-202ENST00000299543 STK38LQ9Y2H1 464 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 NCANO14594 1321 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 ANKRD63C9JTQ0 380 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 CLDN3O15551 220 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 ADRB2P07550 413 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 DUPD1Q68J44 220 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 TTC27Q6P3X3 843 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 EPS8L3Q8TE67 593 aaKnown RBP14.4□□□□□ -0.1
CTDP1-202ENST00000299543 SEMA4DQ92854 862 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 HVCN1Q96D96 273 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 SEC16BQ96JE7 1060 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 TAAR1Q96RJ0 339 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 RANBP17Q9H2T7 1088 aaKnown RBP14.4□□□□□ -0.1
CTDP1-202ENST00000299543 ASIC3Q9UHC3 531 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 SLC12A6Q9UHW9 1150 aa14.4□□□□□ -0.1
CTDP1-202ENST00000299543 ATP9AO75110 1047 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 CHN1P15882 459 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 KIF22Q14807 665 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 FAM133BQ5BKY9 247 aaKnown RBP14.39□□□□□ -0.11
CTDP1-202ENST00000299543 LLGL2Q6P1M3 1020 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 HOOK3Q86VS8 718 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 ZDHHC14Q8IZN3 488 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 AGAP11Q8TF27 550 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 DYDC1Q8WWB3 177 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 POMGNT1Q8WZA1 660 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 RNF25Q96BH1 459 aaPredicted RBP14.39□□□□□ -0.11
CTDP1-202ENST00000299543 ZSWIM1Q9BR11 485 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 KIAA0391O15091 583 aaKnown RBP14.39□□□□□ -0.11
CTDP1-202ENST00000299543 ONECUT3O60422 494 aaPredicted RBP14.39□□□□□ -0.11
CTDP1-202ENST00000299543 PLS3P13797 630 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 VCAM1P19320 739 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 POU5F1Q01860 360 aaKnown RBP14.39□□□□□ -0.11
CTDP1-202ENST00000299543 RASA3Q14644 834 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 LRRC14Q15048 493 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 SNRNP35Q16560 246 aaKnown RBP14.39□□□□□ -0.11
CTDP1-202ENST00000299543 TBC1D25Q3MII6 688 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 MIS18BP1Q6P0N0 1132 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 CNKSR1Q969H4 720 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 TRAPPC3O43617 180 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 TKFCQ3LXA3 575 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 GKAP1Q5VSY0 366 aaPredicted RBP14.39□□□□□ -0.11
CTDP1-202ENST00000299543 EPS8L1Q8TE68 723 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 ATG4AQ8WYN0 398 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 KREMEN1Q96MU8 473 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 HEMGNQ9BXL5 484 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 TRIM7Q9C029 511 aa14.39□□□□□ -0.11
CTDP1-202ENST00000299543 SYNGAP1Q96PV0 1343 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 DENND3A2RUS2 1198 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 FOXO6A8MYZ6 492 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 PHF2O75151 1096 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 LINGO3P0C6S8 592 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 SLC8A1P32418 973 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms