RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SLC5A4Q9NY91 659 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 LMCD1Q9NZU5 365 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 SLC9A2Q9UBY0 812 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 POTEMA6NI47 508 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 F8W8V4 182 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 FAM107AO95990 144 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 CCZ1BP86790 482 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 CCZ1P86791 482 aaPredicted RBP15.67■□□□□ 0.1
SCN3B-201ENST00000299333 TOB2Q14106 344 aaPredicted RBP15.67■□□□□ 0.1
SCN3B-201ENST00000299333 SURF1Q15526 300 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 PTGISQ16647 500 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 ZNF667Q5HYK9 610 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 RHOT1Q8IXI2 618 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 IL17REQ8NFR9 667 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 IP6K2Q9UHH9 426 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 RWDD3Q9Y3V2 267 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 CSADQ9Y600 493 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 CYP2D7A0A087X1C5 515 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 CDH2P19022 906 aaPredicted RBP15.67■□□□□ 0.1
SCN3B-201ENST00000299333 FBXW4P57775 412 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 CCDC81Q6ZN84 652 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 PCCAP05165 728 aaPredicted RBP15.67■□□□□ 0.1
SCN3B-201ENST00000299333 OSBPP22059 807 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 AGBL2Q5U5Z8 902 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 TTC33Q6PID6 262 aaPredicted RBP15.67■□□□□ 0.1
SCN3B-201ENST00000299333 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
SCN3B-201ENST00000299333 TMEM161AQ9NX61 479 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 SYBUQ9NX95 663 aa15.67■□□□□ 0.1
SCN3B-201ENST00000299333 FAM47DPA6NHR8 397 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 ARHGAP22Q7Z5H3 698 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 NIM1KQ8IY84 436 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 BFARQ9NZS9 450 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 AFF4Q9UHB7 1163 aaKnown RBP15.66■□□□□ 0.1
SCN3B-201ENST00000299333 K7ERI5 159 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 STRNO43815 780 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 HOXA13P31271 388 aaPredicted RBP15.66■□□□□ 0.1
SCN3B-201ENST00000299333 ELMSAN1Q6PJG2 1045 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 TTC30BQ8N4P2 665 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 BTN2A2Q8WVV5 523 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 RFFLQ8WZ73 363 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 ABHD8Q96I13 439 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 MMTAG2Q9BU76 263 aaKnown RBP15.66■□□□□ 0.1
SCN3B-201ENST00000299333 INTS2Q9H0H0 1204 aaKnown RBP15.66■□□□□ 0.1
SCN3B-201ENST00000299333 SYNMO15061 1565 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 ATP8B3O60423 1300 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 UBA6A0AVT1 1052 aaPredicted RBP15.66■□□□□ 0.1
SCN3B-201ENST00000299333 TMEM120BA0PK00 339 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 DGKIO75912 1065 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 SRP72O76094 671 aaKnown RBP15.66■□□□□ 0.1
SCN3B-201ENST00000299333 COASYQ13057 564 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 ANGPT1Q15389 498 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 PRPF39Q86UA1 669 aaKnown RBP15.66■□□□□ 0.1
SCN3B-201ENST00000299333 SGSM3Q96HU1 749 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 SMARCAL1Q9NZC9 954 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 TARSP26639 723 aaKnown RBP15.66■□□□□ 0.1
SCN3B-201ENST00000299333 BCAR1P56945 870 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 COBLL1Q53SF7 1204 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 ABI1Q8IZP0 508 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 MAGEB5Q9BZ81 275 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 TRIM45Q9H8W5 580 aaPredicted RBP15.66■□□□□ 0.1
SCN3B-201ENST00000299333 GPR108Q9NPR9 543 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 CIAO1O76071 339 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 RCN1Q15293 331 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 AGBL1Q96MI9 1066 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 AIPL1Q9NZN9 384 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 ZFATQ9P243 1243 aa15.66■□□□□ 0.1
SCN3B-201ENST00000299333 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 LIFRP42702 1097 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 EIF2B2P49770 351 aaKnown RBP15.65■□□□□ 0.1
SCN3B-201ENST00000299333 THNSL1Q8IYQ7 743 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 DYNLL2Q96FJ2 89 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 MAD2L2Q9UI95 211 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 LCMT1Q9UIC8 334 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 LINC00854A0A1B0GVQ3 168 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 FOXN1O15353 648 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 CDH16O75309 829 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 HSPA1AP0DMV8 641 aaKnown RBP15.65■□□□□ 0.1
SCN3B-201ENST00000299333 HSPA1BP0DMV9 641 aaKnown RBP15.65■□□□□ 0.1
SCN3B-201ENST00000299333 ANXA13P27216 316 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 KYNUQ16719 465 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 C6orf10Q5SRN2 563 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 ATP9BO43861 1147 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 MYO1DO94832 1006 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 GDF11O95390 407 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 ABCE1P61221 599 aaKnown RBP15.65■□□□□ 0.1
SCN3B-201ENST00000299333 TRIM25Q14258 630 aaKnown RBP15.65■□□□□ 0.1
SCN3B-201ENST00000299333 ZNF786Q8N393 782 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 OR6P1Q8NGX9 317 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 RAD54LQ92698 747 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 NSL1Q96IY1 281 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 C9orf72Q96LT7 481 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 MXD3Q9BW11 206 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 MTO1Q9Y2Z2 717 aaKnown RBP15.65■□□□□ 0.1
SCN3B-201ENST00000299333 USP17L3A6NCW0 530 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 USP17L4A6NCW7 530 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 GSNP06396 782 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 CCND2P30279 289 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 TNFAIP1Q13829 316 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 KPNB1Q14974 876 aaKnown RBP15.65■□□□□ 0.1
SCN3B-201ENST00000299333 P3H1Q32P28 736 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms