RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 DBNDD1Q9H9R9 158 aa29.45■■■□□ 2.31
CBX4-201ENST00000269397 CHST7Q9NS84 486 aa29.45■■■□□ 2.31
CBX4-201ENST00000269397 KRT16P08779 473 aa29.45■■■□□ 2.3
CBX4-201ENST00000269397 HOXA10P31260 410 aaPredicted RBP29.45■■■□□ 2.3
CBX4-201ENST00000269397 SGO2Q562F6 1265 aa29.45■■■□□ 2.3
CBX4-201ENST00000269397 SLC5A5Q92911 643 aa29.45■■■□□ 2.3
CBX4-201ENST00000269397 KLHL29Q96CT2 875 aa29.45■■■□□ 2.3
CBX4-201ENST00000269397 KREMEN1Q96MU8 473 aa29.45■■■□□ 2.3
CBX4-201ENST00000269397 ZNF577Q9BSK1 485 aa29.45■■■□□ 2.3
CBX4-201ENST00000269397 UBE4BO95155 1302 aa29.45■■■□□ 2.3
CBX4-201ENST00000269397 RFX1P22670 979 aa29.44■■■□□ 2.3
CBX4-201ENST00000269397 RWDD2BP57060 319 aa29.44■■■□□ 2.3
CBX4-201ENST00000269397 TMEM179Q6ZVK1 233 aa29.44■■■□□ 2.3
CBX4-201ENST00000269397 INTS8Q75QN2 995 aaKnown RBP29.44■■■□□ 2.3
CBX4-201ENST00000269397 TAF1LQ8IZX4 1826 aa29.44■■■□□ 2.3
CBX4-201ENST00000269397 SUN1O94901 812 aa29.44■■■□□ 2.3
CBX4-201ENST00000269397 ZNF268Q14587 947 aaPredicted RBP29.44■■■□□ 2.3
CBX4-201ENST00000269397 TRMT10CQ7L0Y3 403 aaKnown RBP29.44■■■□□ 2.3
CBX4-201ENST00000269397 CYP4X1Q8N118 509 aa29.44■■■□□ 2.3
CBX4-201ENST00000269397 GMCL1Q96IK5 515 aa29.44■■■□□ 2.3
CBX4-201ENST00000269397 ROPN1BQ9BZX4 212 aaPredicted RBP29.44■■■□□ 2.3
CBX4-201ENST00000269397 ROPN1Q9HAT0 212 aaPredicted RBP29.44■■■□□ 2.3
CBX4-201ENST00000269397 PAX7P23759 505 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 FMO1Q01740 532 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 SLC9A9Q8IVB4 645 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 SP8Q8IXZ3 490 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 FITM2Q8N6M3 262 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 FAM118BQ9BPY3 351 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 CDC25CP30307 473 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 RASA3Q14644 834 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 ZNF568Q3ZCX4 644 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 RMDN2Q96LZ7 410 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 EBF2Q9HAK2 575 aa29.43■■■□□ 2.3
CBX4-201ENST00000269397 BRAFP15056 766 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 RIPK1Q13546 671 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 GALNTL6Q49A17 601 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 GMCL1P1Q8NEA9 526 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 HERPUD2Q9BSE4 406 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 STRA6Q9BX79 667 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 TRIM7Q9C029 511 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 TMEM117Q9H0C3 514 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 ECE1P42892 770 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 COPS2P61201 443 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 DAB2IPQ5VWQ8 1189 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 PADI6Q6TGC4 694 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 CRELD2Q6UXH1 353 aaPredicted RBP29.42■■■□□ 2.3
CBX4-201ENST00000269397 SPATA21Q7Z572 469 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 SIPA1L1O43166 1804 aa29.42■■■□□ 2.3
CBX4-201ENST00000269397 KIF1CO43896 1103 aaKnown RBP29.41■■■□□ 2.3
CBX4-201ENST00000269397 TATDN1Q6P1N9 297 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 RSRC1Q96IZ7 334 aaKnown RBP29.41■■■□□ 2.3
CBX4-201ENST00000269397 LRRC19Q9H756 370 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 CETPP11597 493 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 MXI1P50539 228 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 ITGA8P53708 1063 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 TCEAL1Q15170 157 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 CEP55Q53EZ4 464 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 FAM71AQ8IYT1 594 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 SEMA4DQ92854 862 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 CCDC127Q96BQ5 260 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 SERPINB12Q96P63 405 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 HSPBP1Q9NZL4 362 aa29.41■■■□□ 2.3
CBX4-201ENST00000269397 PIK3CDO00329 1044 aa29.4■■■□□ 2.3
CBX4-201ENST00000269397 BNIP1Q12981 228 aa29.4■■■□□ 2.3
CBX4-201ENST00000269397 TGS1Q96RS0 853 aaKnown RBP29.4■■■□□ 2.3
CBX4-201ENST00000269397 ZBTB21Q9ULJ3 1066 aa29.4■■■□□ 2.3
CBX4-201ENST00000269397 C15orf41Q9Y2V0 281 aa29.4■■■□□ 2.3
CBX4-201ENST00000269397 A0A1B0GUA9 196 aa29.4■■■□□ 2.3
CBX4-201ENST00000269397 SKAP2O75563 359 aaPredicted RBP29.4■■■□□ 2.3
CBX4-201ENST00000269397 PSPC1Q8WXF1 523 aaKnown RBP29.4■■■□□ 2.3
CBX4-201ENST00000269397 DHX38Q92620 1227 aaKnown RBP29.4■■■□□ 2.3
CBX4-201ENST00000269397 L3MBTL3Q96JM7 780 aaPredicted RBP29.4■■■□□ 2.3
CBX4-201ENST00000269397 SPATA31A6Q5VVP1 1343 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 THAP12O43422 761 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 MTA2O94776 668 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 GZMAP12544 262 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 ADRA2BP18089 450 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 C2CD6Q53TS8 623 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 SRRM1Q8IYB3 904 aaKnown RBP29.39■■■□□ 2.3
CBX4-201ENST00000269397 SRCAPQ6ZRS2 3230 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 TMEM150BA6NC51 233 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 DIAPH2O60879 1101 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 TTC4O95801 387 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 CYP1A2P05177 515 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 CKAP2Q8WWK9 683 aa29.39■■■□□ 2.3
CBX4-201ENST00000269397 STX2P32856 288 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 PSEN1P49768 467 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 CGB2Q6NT52 195 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 PRUNE1Q86TP1 453 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 KCTD17Q8N5Z5 321 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 C12orf50Q8NA57 414 aaPredicted RBP29.38■■■□□ 2.29
CBX4-201ENST00000269397 XXYLT1Q8NBI6 393 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 ZDHHC15Q96MV8 337 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 WHRNQ9P202 907 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 ARL2BPQ9Y2Y0 163 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 ADRB2P07550 413 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 POLR2MP0CAP2 368 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 CYP11B1P15538 503 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 MGAT5Q09328 741 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 LLGL2Q6P1M3 1020 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms