RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 NLRP1Q9C000 1473 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 GREM2Q9H772 168 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 SMYD2Q9NRG4 433 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 SVILO95425 2214 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 F8W8V4 182 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PHKG2P15735 406 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PGM1P36871 562 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ALDH5A1P51649 535 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 DEFA1P59665 94 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DEFA3P59666 94 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 KRR1Q13601 381 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 TOB2Q14106 344 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 LRRC24Q50LG9 513 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 TAF1BQ53T94 588 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 NCCRP1Q6ZVX7 275 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 DGKHQ86XP1 1220 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 HIPK4Q8NE63 616 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ANKZF1Q9H8Y5 726 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 NOD1Q9Y239 953 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PITPNM2Q9BZ72 1349 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 A0A0G2JND7 137 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PNMA6FA0A0J9YX94 578 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 LRRIQ4A6NIV6 560 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PPP1R15BQ5SWA1 713 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 RASGRP2Q7LDG7 609 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 LRRN4CLQ8ND94 238 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 AGAP11Q8TF27 550 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ADAMTS1Q9UHI8 967 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 GPC5P78333 572 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 C16orf72Q14CZ0 275 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 SYDE1Q6ZW31 735 aaPredicted RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 GPR141Q7Z602 305 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 LRRC47Q8N1G4 583 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 SLC7A3Q8WY07 619 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ORC4O43929 436 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 FTCDO95954 541 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 HSPA1AP0DMV8 641 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 HSPA1BP0DMV9 641 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 CYP11B2P19099 503 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 TMPRSS15P98073 1019 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 MCRS1Q96EZ8 462 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PAWRQ96IZ0 340 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 NCKAP5LQ9HCH0 1330 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ARHGEF37A1IGU5 675 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 SNTNA6NMZ2 147 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ARL4AP40617 200 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 GYG1P46976 350 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ATP1A4Q13733 1029 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ALX1Q15699 326 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PCNX4Q63HM2 1172 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 DNAAF3Q8N9W5 541 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PCDH18Q9HCL0 1135 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 SELENONQ9NZV5 590 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 BARX2Q9UMQ3 279 aaPredicted RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 PPLO60437 1756 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 MYO7AQ13402 2215 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 SRRM3A6NNA2 597 aaPredicted RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 CALB1P05937 261 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 NFKBIAP25963 317 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 OLR1P78380 273 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 XRCC4Q13426 336 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ZC3H12AQ5D1E8 599 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 C1orf228Q6PIY5 440 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 GRAMD1CQ8IYS0 662 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 QKIQ96PU8 341 aaKnown RBP eCLIP6.02□□□□□ -1.45
VCAN-201ENST00000265077 SMYD3Q9H7B4 428 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 KCND1Q9NSA2 647 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 SESN1Q9Y6P5 492 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 F8VZ95 297 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 CHEK2O96017 543 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 NR3C1P04150 777 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 SAT1P21673 171 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 C21orf59P57076 290 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 DCAF15Q66K64 600 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 SAMD3Q8N6K7 520 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 UBE2TQ9NPD8 197 aaPredicted RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 STRIP2Q9ULQ0 834 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PVALEFA0A1B0GWK0 134 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 COPEO14579 308 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ASAP2O43150 1006 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 DLGAP3O95886 979 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 KRT1P04264 644 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 EIF4BP23588 611 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 PPARGP37231 505 aaPredicted RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 STK4Q13043 487 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 C15orf59Q2T9L4 293 aaPredicted RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 PPP6R3Q5H9R7 873 aaPredicted RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 LMBRD2Q68DH5 695 aaPredicted RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 TRIM72Q6ZMU5 477 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PRMT1Q99873 361 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 SAYSD1Q9NPB0 183 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 TLR7Q9NYK1 1049 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 A0A1W2PQC6 194 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 CHRNDQ07001 517 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PTK2BQ14289 1009 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 LBRQ14739 615 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 C11orf74Q86VG3 221 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 DQX1Q8TE96 717 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 DEPDC1BQ8WUY9 529 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms