RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ISCUQ9H1K1 167 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 GGA3Q9NZ52 723 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 USH1CQ9Y6N9 552 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 OAZ1P54368 228 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 RWDD2BP57060 319 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 MRPS9P82933 396 aaKnown RBP17.44■□□□□ 0.38
CTCF-201ENST00000264010 ZRSR2Q15696 482 aaKnown RBP17.44■□□□□ 0.38
CTCF-201ENST00000264010 GSTA5Q7RTV2 222 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 VSIG10LQ86VR7 867 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 WNT8AQ9H1J5 351 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 CARD9Q9H257 536 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 OSGEPQ9NPF4 335 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 USTQ9Y2C2 406 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 PASKQ96RG2 1323 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 VIMP08670 466 aaKnown RBP17.44■□□□□ 0.38
CTCF-201ENST00000264010 POLE2P56282 527 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 CYFIP1Q7L576 1253 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 CASKIN2Q8WXE0 1202 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 SYNCQ9H7C4 482 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 WRAP73Q9P2S5 460 aaPredicted RBP17.44■□□□□ 0.38
CTCF-201ENST00000264010 AGO2Q9UKV8 859 aaKnown RBP17.44■□□□□ 0.38
CTCF-201ENST00000264010 ALG6Q9Y672 507 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 HMGB1P1B2RPK0 211 aaPredicted RBP17.44■□□□□ 0.38
CTCF-201ENST00000264010 TISP43B9A030 160 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 KIAA0391O15091 583 aaKnown RBP17.44■□□□□ 0.38
CTCF-201ENST00000264010 GAS8O95995 478 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 MYBL1P10243 752 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 CTNNA2P26232 953 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 PLTPP55058 493 aa17.44■□□□□ 0.38
CTCF-201ENST00000264010 FAM187AA6NFU0 413 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 DAPK3O43293 454 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 MYBL2P10244 700 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 JAM2P57087 298 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 TMC2Q8TDI7 906 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 SPIRE2Q8WWL2 714 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 FAM167BQ9BTA0 163 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 PDGFDQ9GZP0 370 aaPredicted RBP17.43■□□□□ 0.38
CTCF-201ENST00000264010 TMEM117Q9H0C3 514 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 SIX2Q9NPC8 291 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 CYP26B1Q9NR63 512 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 ATP8A1Q9Y2Q0 1164 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 ATP9AO75110 1047 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 MXRA7P84157 204 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 PPP3CAQ08209 521 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 DGKZQ13574 1117 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 ZNF365Q70YC5 407 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 C12orf56Q8IXR9 622 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 INPP4AQ96PE3 977 aaPredicted RBP17.43■□□□□ 0.38
CTCF-201ENST00000264010 MAPK13O15264 365 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 EMC2Q15006 297 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 PPP1R2P3Q6NXS1 205 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
CTCF-201ENST00000264010 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.43■□□□□ 0.38
CTCF-201ENST00000264010 LNX1Q8TBB1 728 aaPredicted RBP17.43■□□□□ 0.38
CTCF-201ENST00000264010 SLC20A1Q8WUM9 679 aa17.43■□□□□ 0.38
CTCF-201ENST00000264010 THOC1Q96FV9 657 aaKnown RBP17.43■□□□□ 0.38
CTCF-201ENST00000264010 ASTN2O75129 1339 aaPredicted RBP17.43■□□□□ 0.38
CTCF-201ENST00000264010 PTPRAP18433 802 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 NR1D1P20393 614 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 ELF1P32519 619 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 PHLDB3Q6NSJ2 640 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 EEPD1Q7L9B9 569 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 ARHGEF19Q8IW93 802 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 CHST13Q8NET6 341 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 ZIM3Q96PE6 472 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 MTFR1LQ9H019 292 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 UVRAGQ9P2Y5 699 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 CHUKO15111 745 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 TTI1O43156 1089 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 GTF2H1P32780 548 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 IREB2P48200 963 aaKnown RBP17.42■□□□□ 0.38
CTCF-201ENST00000264010 DLG4P78352 724 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 PDCLQ13371 301 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 KIF22Q14807 665 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 DCUN1D2Q6PH85 259 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 NT5DC3Q86UY8 548 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 EXOC8Q8IYI6 725 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 ANAPC7Q9UJX3 599 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 TRPC6Q9Y210 931 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 PODXLO00592 558 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 SGPL1O95470 568 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 GARTP22102 1010 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 CHRNA3P32297 505 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 DHX34Q14147 1143 aaKnown RBP17.42■□□□□ 0.38
CTCF-201ENST00000264010 KCTD2Q14681 263 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 TMEM143Q96AN5 459 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 CCDC77Q9BR77 488 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 CD248Q9HCU0 757 aa17.42■□□□□ 0.38
CTCF-201ENST00000264010 GGPS1O95749 300 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 GZMAP12544 262 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 DESP17661 470 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 TNFRSF8P28908 595 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 MAP4K3Q8IVH8 894 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 ARMC2Q8NEN0 867 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 FAM167AQ96KS9 214 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 MRPL47Q9HD33 250 aaKnown RBP17.41■□□□□ 0.38
CTCF-201ENST00000264010 GDF3Q9NR23 364 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 HIBCHQ6NVY1 386 aaPredicted RBP17.41■□□□□ 0.38
CTCF-201ENST00000264010 ZNF513Q8N8E2 541 aaPredicted RBP17.41■□□□□ 0.38
CTCF-201ENST00000264010 ANKS4BQ8N8V4 417 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms