RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MED21Q13503 144 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 TTC8Q8TAM2 541 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 RBM15Q96T37 977 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMG6-201ENST00000263073 EIF2AK1Q9BQI3 630 aaKnown RBP12.75□□□□□ -0.37
SMG6-201ENST00000263073 LXNQ9BS40 222 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 KIFC3Q9BVG8 833 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 ATP6V0A4Q9HBG4 840 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 FAM217BQ9NTX9 383 aaPredicted RBP12.75□□□□□ -0.37
SMG6-201ENST00000263073 AATKQ6ZMQ8 1374 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 HEG1Q9ULI3 1381 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 OSBPP22059 807 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 VCPP55072 806 aaKnown RBP12.75□□□□□ -0.37
SMG6-201ENST00000263073 BCAR1P56945 870 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 DPYDQ12882 1025 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 KYNUQ16719 465 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 EPC2Q52LR7 807 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 SCN4BQ8IWT1 228 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 DCPSQ96C86 337 aaKnown RBP12.75□□□□□ -0.37
SMG6-201ENST00000263073 NOD2Q9HC29 1040 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 DUSP10Q9Y6W6 482 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 PVALEFA0A1B0GWK0 134 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 PDHBP11177 359 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 ZFXP17010 805 aaPredicted RBP12.75□□□□□ -0.37
SMG6-201ENST00000263073 SMARCA1P28370 1054 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 DHX34Q14147 1143 aaKnown RBP12.75□□□□□ -0.37
SMG6-201ENST00000263073 TRIP10Q15642 601 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 BARHL2Q9NY43 387 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 FHOD1Q9Y613 1164 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 LRRN4CLQ8ND94 238 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 OR6P1Q8NGX9 317 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 C20orf96Q9NUD7 363 aaPredicted RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 CHMP2BQ9UQN3 213 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 AGTP01019 485 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 CALB1P05937 261 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 KCNA4P22459 653 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 PAPOLAP51003 745 aaKnown RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 PTGISQ16647 500 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 DGKHQ86XP1 1220 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 PGBD4Q96DM1 585 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 GABBR1Q9UBS5 961 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 A0A1W2PQC6 194 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 LRRIQ3A6PVS8 624 aaPredicted RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 CCDC22O60826 627 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 MYBP10242 640 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 CORO7P57737 925 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 BYSLQ13895 437 aaKnown RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 LVRNQ6Q4G3 990 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 USP33Q8TEY7 942 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 RMDN3Q96TC7 470 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 EGFL8Q99944 293 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 MOSPD1Q9UJG1 213 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 PITPNM2Q9BZ72 1349 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 B2RBV5 119 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 ZCCHC18P0CG32 403 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 SLC9A1P19634 815 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 SDC4P31431 198 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 NLRP11P59045 1033 aaKnown RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 CCDC92Q53HC0 331 aaPredicted RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 SMIM5Q71RC9 77 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 BZW1Q7L1Q6 419 aaKnown RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 ARMCX2Q7L311 632 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 DNAAF5Q86Y56 855 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 CLEC10AQ8IUN9 316 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 TTC13Q8NBP0 860 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 CASS4Q9NQ75 786 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 ADD3Q9UEY8 706 aaKnown RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 XPO7Q9UIA9 1087 aaKnown RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 PRR36Q9H6K5 1346 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 PHF2O75151 1096 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 APRTP07741 180 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 ANXA13P27216 316 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 STK4Q13043 487 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 CC2D2BQ6DHV5 1058 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 SPIRE2Q8WWL2 714 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
SMG6-201ENST00000263073 SLC5A4Q9NY91 659 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 TEKT2Q9UIF3 430 aa12.74□□□□□ -0.37
SMG6-201ENST00000263073 E5RI56 91 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 GRAP2O75791 330 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 KCNA2P16389 499 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 PSMC5P62195 406 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 TFDP2Q14188 446 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 SMTNL2Q2TAL5 461 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 PPP1R2P3Q6NXS1 205 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
SMG6-201ENST00000263073 LRRC34Q8IZ02 419 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 EME1Q96AY2 570 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 ULK4Q96C45 1275 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 WWP1Q9H0M0 922 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 CYP26B1Q9NR63 512 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 UBE2Q2LH0YL09 131 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 RFX1P22670 979 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 SLFN12LQ6IEE8 588 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 TSC22D4Q9Y3Q8 395 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 NEU2Q9Y3R4 380 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms