RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-202ENST00000262396 LILRB3O75022 631 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 RFPL2O75678 378 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 SPATA31C1P0DKV0 1188 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 EFNA5P52803 228 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 YARSP54577 528 aaKnown RBP13.5□□□□□ -0.25
TRAF4-202ENST00000262396 TCF15Q12870 199 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 ELAVL2Q12926 359 aaKnown RBP13.5□□□□□ -0.25
TRAF4-202ENST00000262396 DCAF4L1Q3SXM0 396 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 FAM171A1Q5VUB5 890 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 KIAA0319Q5VV43 1072 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 KRT79Q5XKE5 535 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 MCTP1Q6DN14 999 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 PDXDC1Q6P996 788 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 GET4Q7L5D6 327 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-202ENST00000262396 NOSTRINQ8IVI9 506 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 SNX29Q8TEQ0 813 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 HDAC7Q8WUI4 952 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 KIFAP3Q92845 792 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 TTPALQ9BTX7 342 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 GPR62Q9BZJ7 368 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 BHMT2Q9H2M3 363 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 KCNK12Q9HB15 430 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 RXFP1Q9HBX9 757 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 KIAA1024Q9UPX6 916 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 F8W810 466 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 K7ERI5 159 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 ACKR2O00590 384 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 TGM5O43548 720 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 GFRA3O60609 400 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 RECQL4O94761 1208 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 CFHP08603 1231 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 RPL17P18621 184 aaKnown RBP13.49□□□□□ -0.25
TRAF4-202ENST00000262396 MUTP22033 750 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 TRAPPC10P48553 1259 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 PPM1LQ5SGD2 360 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 SIX5Q8N196 739 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 PHOX2BQ99453 314 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 TCHPQ9BT92 498 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 FZD8Q9H461 694 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 PDZD7Q9H5P4 517 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 WDR6Q9NNW5 1121 aaKnown RBP13.49□□□□□ -0.25
TRAF4-202ENST00000262396 DDX19AQ9NUU7 478 aaKnown RBP13.49□□□□□ -0.25
TRAF4-202ENST00000262396 ZDHHC7Q9NXF8 308 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.49□□□□□ -0.256e-10■□□□□ 8.2
TRAF4-202ENST00000262396 FNIP2Q9P278 1114 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 DNM3Q9UQ16 869 aa13.49□□□□□ -0.25
TRAF4-202ENST00000262396 ZMYM2Q9UBW7 1377 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 TRAPPC3O43617 180 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 ST18O60284 1047 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 XYLBO75191 536 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-202ENST00000262396 CLCN5P51795 746 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 DMP1Q13316 513 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-202ENST00000262396 PSMD5Q16401 504 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 FAM187BQ17R55 369 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 ATF7IP2Q5U623 682 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 CDCA2Q69YH5 1023 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-202ENST00000262396 PRSS55Q6UWB4 352 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-202ENST00000262396 FBXO18Q8NFZ0 1043 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 RTP3Q9BQQ7 232 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 KIFC3Q9BVG8 833 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 CCDC94Q9BW85 323 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-202ENST00000262396 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 POLD4Q9HCU8 107 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 TOPORSQ9NS56 1045 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-202ENST00000262396 CHST7Q9NS84 486 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 DUSP12Q9UNI6 340 aa13.48□□□□□ -0.25
TRAF4-202ENST00000262396 PIEZO1Q92508 2521 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 PHLPP2Q6ZVD8 1323 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 H3BQV1 296 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 B3GAT3O94766 335 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 KIF4AO95239 1232 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 SEC24BO95487 1268 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 HARSP12081 509 aaKnown RBP13.47□□□□□ -0.25
TRAF4-202ENST00000262396 FSHRP23945 695 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 MATR3P43243 847 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAF4-202ENST00000262396 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAF4-202ENST00000262396 PEX3P56589 373 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 DTHD1Q6ZMT9 781 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 GPR65Q8IYL9 337 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 TMEM105Q8N8V8 129 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 BSNDQ8WZ55 320 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 NXPE3Q969Y0 559 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 DRC1Q96MC2 740 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 PRKD2Q9BZL6 878 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 UPF2Q9HAU5 1272 aaKnown RBP13.47□□□□□ -0.25
TRAF4-202ENST00000262396 CACNG4Q9UBN1 327 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 DAXXQ9UER7 740 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-202ENST00000262396 CA14Q9ULX7 337 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 USP20Q9Y2K6 914 aa13.47□□□□□ -0.25
TRAF4-202ENST00000262396 ZMYND10O75800 440 aa13.46□□□□□ -0.25
TRAF4-202ENST00000262396 C1RP00736 705 aa13.46□□□□□ -0.25
TRAF4-202ENST00000262396 ELF1P32519 619 aa13.46□□□□□ -0.25
TRAF4-202ENST00000262396 OSTNP61366 133 aa13.46□□□□□ -0.25
TRAF4-202ENST00000262396 STRN3Q13033 797 aa13.46□□□□□ -0.25
TRAF4-202ENST00000262396 PTGDRQ13258 359 aa13.46□□□□□ -0.25
TRAF4-202ENST00000262396 NBR1Q14596 966 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms