RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 PDXDC1Q6P996 788 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 PPM1NQ8N819 430 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 SNF8Q96H20 258 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 MAML3Q96JK9 1138 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 MID2Q9UJV3 735 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 ABT1Q9ULW3 272 aaKnown RBP11.58□□□□□ -0.56
DCLK1-201ENST00000255448 AURKCQ9UQB9 309 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 ANGPTL3Q9Y5C1 460 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 C16orf72Q14CZ0 275 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 VPS72Q15906 364 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 MIGA2Q7L4E1 593 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
DCLK1-201ENST00000255448 INPP5FQ9Y2H2 1132 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 M0R3G1 203 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 GH2P01242 217 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 FOXD4Q12950 439 aaPredicted RBP11.58□□□□□ -0.56
DCLK1-201ENST00000255448 PDIA2Q13087 525 aaKnown RBP11.58□□□□□ -0.56
DCLK1-201ENST00000255448 DDI1Q8WTU0 396 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 PRPF18Q99633 342 aaKnown RBP11.58□□□□□ -0.56
DCLK1-201ENST00000255448 ISCUQ9H1K1 167 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 PCDHB4Q9Y5E5 795 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 CROCC2H7BZ55 1655 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 CDH16O75309 829 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 LRRC8EQ6NSJ5 796 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 PPP1R18Q6NYC8 613 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 IZUMO2Q6UXV1 221 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 TRIM67Q6ZTA4 783 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 RFWD2Q8NHY2 731 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 C1orf54Q8WWF1 131 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 PAWRQ96IZ0 340 aaKnown RBP11.58□□□□□ -0.56
DCLK1-201ENST00000255448 MTRQ99707 1265 aa11.58□□□□□ -0.56
DCLK1-201ENST00000255448 MRPL47Q9HD33 250 aaKnown RBP11.58□□□□□ -0.56
DCLK1-201ENST00000255448 STK36Q9NRP7 1315 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 DLGAP3O95886 979 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 PPP4R3CPQ6ZMV5 832 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 RAB44Q7Z6P3 723 aaPredicted RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 DNAAF3Q8N9W5 541 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 MARCOQ9UEW3 520 aaPredicted RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 SMG5Q9UPR3 1016 aaKnown RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 A6NJR5 290 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 ABL1P00519 1130 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 GHRP10912 638 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 GYS1P13807 737 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 JAK3P52333 1124 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 DNAJC3Q13217 504 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 PDXDC2PQ6P474 469 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 PLD3Q8IV08 490 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 APOL6Q9BWW8 343 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 CAB39Q9Y376 341 aaPredicted RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 C1orf167Q5SNV9 1468 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 ORC4O43929 436 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 ECE2O60344 883 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 VCAM1P19320 739 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 PPIDQ08752 370 aaKnown RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 SF3B3Q15393 1217 aaKnown RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 EPHA10Q5JZY3 1008 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 APOBEC3FQ8IUX4 373 aaKnown RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 HOXC10Q9NYD6 342 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 SENP1Q9P0U3 644 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 LRFN2Q9ULH4 789 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 DTNAQ9Y4J8 743 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 UBN2Q6ZU65 1347 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 ZNF233A6NK53 670 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 PLA2G4BP0C869 781 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 RPS6P62753 249 aaKnown RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 BBS5Q8N3I7 341 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 ZNF507Q8TCN5 953 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 SUCLA2Q9P2R7 463 aaPredicted RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 LRCH1Q9Y2L9 728 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 CAPN1P07384 714 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 ARHGDIAP52565 204 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 SLC29A2Q14542 456 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 EFTUD2Q15029 972 aaKnown RBP eCLIP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 TBC1D9BQ66K14 1250 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 PLEKHA7Q6IQ23 1121 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 IYDQ6PHW0 289 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 TLK2Q86UE8 772 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 GIMAP8Q8ND71 665 aaPredicted RBP11.57□□□□□ -0.56
DCLK1-201ENST00000255448 CYGBQ8WWM9 190 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 FAM167AQ96KS9 214 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 RNPEPQ9H4A4 650 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 TMBIM4Q9HC24 238 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 FEM1BQ9UK73 627 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 ITGB1BP2Q9UKP3 347 aa11.57□□□□□ -0.56
DCLK1-201ENST00000255448 MROH7-TTC4A0A0A0MT08 1334 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 IL10P22301 178 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 GSTT1P30711 240 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 S100A5P33763 92 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 DEFA1P59665 94 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 DEFA3P59666 94 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 ALX1Q15699 326 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 IZUMO3Q5VZ72 239 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 RBBP8NLQ8NC74 664 aaPredicted RBP11.56□□□□□ -0.56
DCLK1-201ENST00000255448 KCNK16Q96T55 309 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 GORASP1Q9BQQ3 440 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 VPS11Q9H270 941 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 AGPAT5Q9NUQ2 364 aa11.56□□□□□ -0.56
DCLK1-201ENST00000255448 PRKAG2Q9UGJ0 569 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms