RNA–Protein interactions for RNA: ENST00000249776.12

KNSTRN-201, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNSTRN, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-201ENST00000249776 NKRFO15226 690 aaKnown RBP eCLIP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 SSBP05455 408 aaKnown RBP eCLIP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 TLE2Q04725 743 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 FSCN1Q16658 493 aaKnown RBP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 KNOP1Q1ED39 458 aaKnown RBP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 ANKRD33Q7Z3H0 272 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 PEX26Q7Z412 305 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 SLFN11Q7Z7L1 901 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 MBOAT7Q96N66 472 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 CCT8L2Q96SF2 557 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 SEZ6LQ9BYH1 1024 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 WDR11Q9BZH6 1224 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 PSTPIP2Q9H939 334 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 PDLIM7Q9NR12 457 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 EHD2Q9NZN4 543 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 UTP11Q9Y3A2 253 aaKnown RBP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 GMNCA6NCL1 334 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 DCDC2CA8MYV0 355 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 DYNC1LI2O43237 492 aaPredicted RBP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 CEP104O60308 925 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 PAEPP09466 180 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 CLTBP09497 229 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 GAP43P17677 238 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 CYP11B2P19099 503 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 NR2F2P24468 414 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 HNRNPH1P31943 449 aaKnown RBP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 CTNNA1P35221 906 aaKnown RBP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 HSD17B4P51659 736 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 GUCY2FP51841 1108 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 NFIL3Q16649 462 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 BMT2Q1RMZ1 405 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 ALKBH5Q6P6C2 394 aaKnown RBP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 CCDC121Q6ZUS5 278 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 KCNK18Q7Z418 384 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 IRF2BP2Q7Z5L9 587 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 HOOK3Q86VS8 718 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 MYCBPAPQ8TBZ2 947 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 SCFD1Q8WVM8 642 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 HAS1Q92839 578 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 PRDM5Q9NQX1 630 aaPredicted RBP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 TYW1Q9NV66 732 aaKnown RBP16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 NAGPAQ9UK23 515 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 KIAA1024Q9UPX6 916 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 DNM3Q9UQ16 869 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 CAPN7Q9Y6W3 813 aa16.7■□□□□ 0.26
KNSTRN-201ENST00000249776 GOLGA6L10A0A0M3HER8 536 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 PPP1R11O60927 126 aaPredicted RBP16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 FAM153BP0C7A2 387 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 UCHL3P15374 230 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 HSD17B3P37058 310 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 ATP1A2P50993 1020 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 FAM153CQ494X1 144 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 KCTD16Q68DU8 428 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 KLHL7Q8IXQ5 586 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 TDHQ8IZJ6 230 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 CENPTQ96BT3 561 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 RMDN3Q96TC7 470 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 KCNMB3Q9NPA1 279 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 SMARCAL1Q9NZC9 954 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 FAM153AQ9UHL3 310 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 AMFRQ9UKV5 643 aa16.69■□□□□ 0.26
KNSTRN-201ENST00000249776 KIAA1217Q5T5P2 1943 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 FAM187AA6NFU0 413 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 KRIT1O00522 736 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 PQBP1O60828 265 aaKnown RBP16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 CFBP00751 764 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 FOSP01100 380 aaPredicted RBP16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 STAT1P42224 750 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 MNAT1P51948 309 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 SMTNP53814 917 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 BEX3Q00994 111 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 IFFO1Q0D2I5 559 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 BRDTQ58F21 947 aaPredicted RBP16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 STXBP4Q6ZWJ1 553 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 SYT2Q8N9I0 419 aaPredicted RBP16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 LRRC57Q8N9N7 239 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 TPCN2Q8NHX9 752 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 SEC14L1Q92503 715 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 ZBTB9Q96C00 473 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 FAM20AQ96MK3 541 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 SAMM50Q9Y512 469 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 UBE4BO95155 1302 aa16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 RANBP2P49792 3224 aaKnown RBP16.68■□□□□ 0.26
KNSTRN-201ENST00000249776 TMCO5BA8MYB1 307 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 E7EVH7 732 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 ARVCFO00192 962 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 OPLAHO14841 1288 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 SART1O43290 800 aaKnown RBP16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 RFX1P22670 979 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 CPT1AP50416 773 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 SLC12A3P55017 1021 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 PPP2R2AP63151 447 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 PTK2Q05397 1052 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 ACTN3Q08043 901 aaPredicted RBP16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 TTLL4Q14679 1199 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 STXBP2Q15833 593 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 SKIDA1Q1XH10 827 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 ARHGEF16Q5VV41 709 aa16.67■□□□□ 0.26
KNSTRN-201ENST00000249776 NELFCDQ8IXH7 590 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms