RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 KLHL30Q0D2K2 578 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 MBTPS1Q14703 1052 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 SLC9A7Q96T83 725 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 YME1L1Q96TA2 773 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 PCYT2Q99447 389 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 PCDHA10Q9Y5I2 948 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 CDY2AQ9Y6F7 541 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 DOCK5Q9H7D0 1870 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 RRN3P2A6NIE6 340 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 EXOC3O60645 756 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 PARNO95453 639 aaKnown RBP9.4□□□□□ -0.9
VPS4B-201ENST00000238497 SPATA31C1P0DKV0 1188 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 KIF11P52732 1056 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 WDR5P61964 334 aaKnown RBP9.4□□□□□ -0.9
VPS4B-201ENST00000238497 KRT76Q01546 638 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 GIT2Q14161 759 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS4B-201ENST00000238497 ZNF507Q8TCN5 953 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 LXNQ9BS40 222 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 NUP58Q9BVL2 599 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 CDC23Q9UJX2 597 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 EMSYQ7Z589 1322 aa9.4□□□□□ -0.9
VPS4B-201ENST00000238497 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 LRRN2O75325 713 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 KIF20AO95235 890 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 FTCDO95954 541 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 AMHP03971 560 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 ABCB4P21439 1286 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 NPEPPSP55786 919 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 IER5Q5VY09 327 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 EP400NLQ6ZTU2 488 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 GSPT2Q8IYD1 628 aaKnown RBP9.39□□□□□ -0.91
VPS4B-201ENST00000238497 SECISBP2LQ93073 1101 aaKnown RBP9.39□□□□□ -0.91
VPS4B-201ENST00000238497 OSBPL7Q9BZF2 842 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 ARFGAP3Q9NP61 516 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 GPRC5CQ9NQ84 441 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 AKT3Q9Y243 479 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 REXO2Q9Y3B8 237 aaKnown RBP9.39□□□□□ -0.91
VPS4B-201ENST00000238497 MRFAP1Q9Y605 127 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 NFASCO94856 1347 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 VCANP13611 3396 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 SCN5AQ14524 2016 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 IGLV3-22A0A075B6J6 115 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 ABHD14A-ACY1A0A1B0GW23 586 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 HBP1O60381 514 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 TADA3O75528 432 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 CYP3A4P08684 503 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 HARSP12081 509 aaKnown RBP9.39□□□□□ -0.91
VPS4B-201ENST00000238497 RPA1P27694 616 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 FAM102BQ5T8I3 360 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 SFMBT2Q5VUG0 894 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 PLA2G4FQ68DD2 849 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 HS2ST1Q7LGA3 356 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 NOA1Q8NC60 698 aaKnown RBP9.39□□□□□ -0.91
VPS4B-201ENST00000238497 FAM84AQ96KN4 292 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 NAP1L4Q99733 375 aaKnown RBP9.39□□□□□ -0.91
VPS4B-201ENST00000238497 UNC45AQ9H3U1 944 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 L2HGDHQ9H9P8 463 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 KCNMB3Q9NPA1 279 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 UNC80Q8N2C7 3258 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 CHD7Q9P2D1 2997 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 EFCAB8A8MWE9 144 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 K7ENM7 598 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 EPB41P11171 864 aaKnown RBP9.39□□□□□ -0.91
VPS4B-201ENST00000238497 LRRC63Q05C16 580 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 TRIM71Q2Q1W2 868 aaKnown RBP9.39□□□□□ -0.91
VPS4B-201ENST00000238497 TMEM119Q4V9L6 283 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 XKR9Q5GH70 373 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 NIPA1Q7RTP0 329 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 ETNPPLQ8TBG4 499 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 ATP8B4Q8TF62 1192 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 KIFC3Q9BVG8 833 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 ARHGAP20Q9P2F6 1191 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
VPS4B-201ENST00000238497 HYOU1Q9Y4L1 999 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 SAR1BQ9Y6B6 198 aa9.39□□□□□ -0.91
VPS4B-201ENST00000238497 LTBP2Q14767 1821 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 BAIAP3O94812 1187 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 SLITRK3O94933 977 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 CD52P31358 61 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 SLC7A5Q01650 507 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 PRPF4BQ13523 1007 aaKnown RBP9.38□□□□□ -0.91
VPS4B-201ENST00000238497 GPNMBQ14956 572 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 KNOP1Q1ED39 458 aaKnown RBP9.38□□□□□ -0.91
VPS4B-201ENST00000238497 MTERF2Q49AM1 385 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 RASIP1Q5U651 963 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 ZNF746Q6NUN9 644 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-201ENST00000238497 RINT1Q6NUQ1 792 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 ABHD15Q6UXT9 468 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 LRRC71Q8N4P6 559 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 VWCEQ96DN2 955 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 FAM20AQ96MK3 541 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 HAUS4Q9H6D7 363 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 CHORDC1Q9UHD1 332 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-201ENST00000238497 PCDHA13Q9Y5I0 950 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 PCDHA11Q9Y5I1 949 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 LCHNA4D1U4 455 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 TACC1O75410 805 aa9.38□□□□□ -0.91
VPS4B-201ENST00000238497 CLCN3P51790 818 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms