RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SULT1E1P49888 294 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 ESRRGP62508 458 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 EMC2Q15006 297 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 STKLD1Q8NE28 680 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 TMEM39BQ9GZU3 492 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 L3MBTL1Q9Y468 752 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 ANO9A1A5B4 782 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 GPS1Q13098 491 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 FSCBQ5H9T9 825 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 C16orf86Q6ZW13 317 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 POLRMTO00411 1230 aaKnown RBP20.06■□□□□ 0.8
SMPD3-201ENST00000219334 MAPK13O15264 365 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 TFRCP02786 760 aaKnown RBP20.06■□□□□ 0.8
SMPD3-201ENST00000219334 ACOT2P49753 483 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 TMEM62Q0P6H9 643 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 GTF2H3Q13889 308 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 NUGGCQ68CJ6 796 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 GLYCTKQ8IVS8 523 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 RRN3P2A6NIE6 340 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 CTIFO43310 598 aaKnown RBP20.06■□□□□ 0.8
SMPD3-201ENST00000219334 ZNF211Q13398 564 aaPredicted RBP20.06■□□□□ 0.8
SMPD3-201ENST00000219334 MED15Q96RN5 788 aa20.06■□□□□ 0.8
SMPD3-201ENST00000219334 LUC7L3O95232 432 aaKnown RBP20.05■□□□□ 0.8
SMPD3-201ENST00000219334 TRMT10CQ7L0Y3 403 aaKnown RBP20.05■□□□□ 0.8
SMPD3-201ENST00000219334 ZNF467Q7Z7K2 595 aaPredicted RBP20.05■□□□□ 0.8
SMPD3-201ENST00000219334 LCA5Q86VQ0 697 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 HBP1O60381 514 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 EEF1B2P24534 225 aaKnown RBP20.05■□□□□ 0.8
SMPD3-201ENST00000219334 RASIP1Q5U651 963 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 KRT80Q6KB66 452 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 SEPT5Q99719 369 aaPredicted RBP20.05■□□□□ 0.8
SMPD3-201ENST00000219334 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.05■□□□□ 0.8
SMPD3-201ENST00000219334 GTF2A2P52657 109 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 KCNA1Q09470 495 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 SGSM1Q2NKQ1 1148 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 FAM133BQ5BKY9 247 aaKnown RBP20.05■□□□□ 0.8
SMPD3-201ENST00000219334 SARM1Q6SZW1 724 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 SH2D3AQ9BRG2 576 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 PITPNM3Q9BZ71 974 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 KCND2Q9NZV8 630 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 CHRNA3P32297 505 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 RASSF3Q86WH2 238 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 CLEC10AQ8IUN9 316 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 TEX12Q9BXU0 123 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 WDR35Q9P2L0 1181 aa20.05■□□□□ 0.8
SMPD3-201ENST00000219334 SLC16A3O15427 465 aaKnown RBP20.04■□□□□ 0.8
SMPD3-201ENST00000219334 PCSK1P29120 753 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 PPP4R4Q6NUP7 873 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 TRIM59Q8IWR1 403 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 PPARGC1AQ9UBK2 798 aaKnown RBP20.04■□□□□ 0.8
SMPD3-201ENST00000219334 LAMC2Q13753 1193 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 KCNB1Q14721 858 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 XRRA1Q6P2D8 792 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 GOLPH3LQ9H4A5 285 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 CNTNAP4Q9C0A0 1308 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 CYP26A1O43174 497 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 NTSR2O95665 410 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 KRT14P02533 472 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 PRKCEQ02156 737 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 TBC1D19Q8N5T2 526 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 SYNDIG1Q9H7V2 258 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 SH3BP1Q9Y3L3 701 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 SLC4A7Q9Y6M7 1214 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 SPATA31A5Q5VU36 1347 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 SPATA31A7Q8IWB4 1347 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 A0A0G2JND7 137 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 OR1G1P47890 313 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 SYT2Q8N9I0 419 aaPredicted RBP20.04■□□□□ 0.8
SMPD3-201ENST00000219334 RFFLQ8WZ73 363 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 BPIFA3Q9BQP9 254 aa20.04■□□□□ 0.8
SMPD3-201ENST00000219334 TSPYL2Q9H2G4 693 aaPredicted RBP20.04■□□□□ 0.8
SMPD3-201ENST00000219334 HNRNPCL2B2RXH8 293 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 HNRNPCL1O60812 293 aaKnown RBP20.03■□□□□ 0.8
SMPD3-201ENST00000219334 CSF1RP07333 972 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 ACTR2P61160 394 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 KRT17Q04695 432 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 MORF4L2Q15014 288 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 FBXO41Q8TF61 875 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 AGPAT1Q99943 283 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 CCSER1Q9C0I3 900 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 ALDH8A1Q9H2A2 487 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-201ENST00000219334 COG4Q9H9E3 785 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 PLAAQ9Y263 795 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 CHD1O14646 1710 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 MOV10L1Q9BXT6 1211 aaKnown RBP20.03■□□□□ 0.8
SMPD3-201ENST00000219334 PRMT7Q9NVM4 692 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-201ENST00000219334 DOLKQ9UPQ8 538 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 IL18RAPO95256 599 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 HMBSP08397 361 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 ATICP31939 592 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 SSTR3P32745 418 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-201ENST00000219334 NCOA4Q13772 614 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 MGAT5BQ3V5L5 792 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 ANKRD40Q6AI12 368 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 TEKT4Q8WW24 435 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 AIPL1Q9NZN9 384 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 DDX5P17844 614 aaKnown RBP20.03■□□□□ 0.8
SMPD3-201ENST00000219334 CYP2C19P33261 490 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 SV2CQ496J9 727 aa20.03■□□□□ 0.8
SMPD3-201ENST00000219334 SLC26A7Q8TE54 656 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms