RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 PMM2O15305 246 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 P4HA2O15460 535 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 B4GALT4O60513 344 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 CASP14P31944 242 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 GTF2H1P32780 548 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 TNFSF9P41273 254 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 KYAT1Q16773 422 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 EXOC3L4Q17RC7 722 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 NOTUMQ6P988 496 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 BRSK2Q8IWQ3 736 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 THNSL1Q8IYQ7 743 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 U2AF1L4Q8WU68 220 aaKnown RBP17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 ZNF830Q96NB3 372 aaPredicted RBP17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 POP1Q99575 1024 aaKnown RBP17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 TTYH3Q9C0H2 523 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 CAPN11Q9UMQ6 739 aa17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 NOC2LQ9Y3T9 749 aaKnown RBP17.31■□□□□ 0.36
SNRPD3-201ENST00000215829 TTC26A0AVF1 554 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 CAND2O75155 1236 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 TFRCP02786 760 aaKnown RBP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 CTSHP09668 335 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 DLATP10515 647 aaKnown RBP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 PON1P27169 355 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 GCLMP48507 274 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 FXR1P51114 621 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 ADKP55263 362 aaKnown RBP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 MYL7Q01449 175 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 POU5F1Q01860 360 aaKnown RBP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 DCAF4L1Q3SXM0 396 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 APBB1IPQ7Z5R6 666 aaPredicted RBP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 TC2NQ8N9U0 490 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 NEK11Q8NG66 645 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 FNBP1Q96RU3 617 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 TMEM117Q9H0C3 514 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 PDE11AQ9HCR9 933 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 FAM207AQ9NSI2 230 aaPredicted RBP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 RNF225M0QZC1 329 aaPredicted RBP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 TULP1O00294 542 aaPredicted RBP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 SLC9A1P19634 815 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 WNT7BP56706 349 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 GOLGA8FQ08AF8 430 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 GOLGA8DPQ0D2H9 430 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 CETN1Q12798 172 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 FAM26DQ5JW98 314 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 SLC27A1Q6PCB7 646 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 FAM228AQ86W67 206 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 CNGA4Q8IV77 575 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 CEP120Q8N960 986 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 LSM14BQ9BX40 385 aaKnown RBP17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 TMEM8AQ9HCN3 771 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 PLCB1Q9NQ66 1216 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 GCNT4Q9P109 453 aa17.3■□□□□ 0.36
SNRPD3-201ENST00000215829 A0A1W2PQJ5 194 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 MFAP3LO75121 409 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 RPS6KA5O75582 802 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 NOL4O94818 638 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 CLTAP09496 248 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 STAG3L1P0CL83 205 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 MNX1P50219 401 aaPredicted RBP17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 MXI1P50539 228 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 OSTNP61366 133 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 SURF1Q15526 300 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 KRT39Q6A163 491 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 DPY19L2P1Q6NXN4 242 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 EDEM3Q9BZQ6 932 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 KCNF1Q9H3M0 494 aa17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 PIN4Q9Y237 131 aaKnown RBP17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 LUC7L2Q9Y383 392 aaKnown RBP17.29■□□□□ 0.36
SNRPD3-201ENST00000215829 EPHB6O15197 1021 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 TNNI1P19237 187 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 LRMPQ12912 555 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 ENOX2Q16206 610 aaKnown RBP17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 TMEM192Q8IY95 271 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 EHBP1Q8NDI1 1231 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 ZNF516Q92618 1163 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 CCDC51Q96ER9 411 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 CGRRF1Q99675 332 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 RPF1Q9H9Y2 349 aaKnown RBP17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 TOPORSQ9NS56 1045 aaPredicted RBP17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 NPTXRO95502 500 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 CKBP12277 381 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 ACTN1P12814 892 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 KRT9P35527 623 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 ZBED6P86452 979 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 EPC2Q52LR7 807 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 ZNF618Q5T7W0 954 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 TRIM65Q6PJ69 517 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 SV2AQ7L0J3 742 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 FAM126BQ8IXS8 530 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 ZNF397Q8NF99 534 aaPredicted RBP17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 LMO3Q8TAP4 145 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 PANX2Q96RD6 677 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 EIF2AQ9BY44 585 aaKnown RBP17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 ST3GAL5Q9UNP4 418 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 COQ4Q9Y3A0 265 aa17.28■□□□□ 0.36
SNRPD3-201ENST00000215829 GPR182O15218 404 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 IL18RAPO95256 599 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 CD4P01730 458 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 C4BPAP04003 597 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms