RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 AP1M1Q9BXS5 423 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.89□□□□□ -0.99
VAMP3-201ENST00000054666 NOCTQ9UK39 431 aaKnown RBP8.89□□□□□ -0.99
VAMP3-201ENST00000054666 AGO2Q9UKV8 859 aaKnown RBP8.89□□□□□ -0.99
VAMP3-201ENST00000054666 NFU1Q9UMS0 254 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 PPME1Q9Y570 386 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 ESYT3A0FGR9 886 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 IRF6O14896 467 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 GGPS1O95749 300 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 PIGRP01833 764 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 FGGP02679 453 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 CYP11B1P15538 503 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 GLRA2P23416 452 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 GGCXP38435 758 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 CARSP49589 748 aaKnown RBP8.89□□□□□ -0.99
VAMP3-201ENST00000054666 STAT5BP51692 787 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 GYS2P54840 703 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 CDR2Q01850 454 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 ALS2CLQ60I27 953 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 METTL7BQ6UX53 244 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 SLC47A2Q86VL8 602 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 ASAP3Q8TDY4 903 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 MORC4Q8TE76 937 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 ZBTB9Q96C00 473 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 ZNF653Q96CK0 615 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 RNPC3Q96LT9 517 aaKnown RBP8.89□□□□□ -0.99
VAMP3-201ENST00000054666 NIFKQ9BYG3 293 aaKnown RBP8.89□□□□□ -0.99
VAMP3-201ENST00000054666 FAM204AQ9H8W3 233 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 ANKFY1Q9P2R3 1169 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 TTC7AQ9ULT0 858 aaPredicted RBP8.89□□□□□ -0.99
VAMP3-201ENST00000054666 SIP14410 1827 aa8.89□□□□□ -0.99
VAMP3-201ENST00000054666 IGKV6D-21A0A0A0MT36 114 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 FAM170AA1A519 330 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 TMEM110-MUSTN1A8MSY1 372 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 GOLGA8KD6RF30 607 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 NOP56O00567 594 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 CXCL11O14625 94 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 SYF2O95926 243 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 MMEP08473 750 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 ATP4AP20648 1035 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 TCF7P36402 384 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 ARL2P36404 184 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 FMO1Q01740 532 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 TCEAL1Q15170 157 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 SEL1L2Q5TEA6 688 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 KCNV1Q6PIU1 500 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 LEKR1Q6ZMV7 388 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 EIF1ADQ8N9N8 165 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 ZNF564Q8TBZ8 553 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 CASKIN2Q8WXE0 1202 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 PSPC1Q8WXF1 523 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 SEPT1Q8WYJ6 367 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 MSTO1Q9BUK6 570 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 DDX47Q9H0S4 455 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 ASCC2Q9H1I8 757 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 PLEKHA4Q9H4M7 779 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 TAF1DQ9H5J8 278 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 RBAKQ9NYW8 714 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 UVRAGQ9P2Y5 699 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 GTF3C4Q9UKN8 822 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 AGTPBP1Q9UPW5 1226 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 LRRC37A2A6NM11 1700 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 GOLGA6CA6NDK9 693 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 ZSCAN5CA6NGD5 496 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 SPDYE5A6NIY4 337 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 DDX3YO15523 660 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 SART1O43290 800 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 GAS2O43903 313 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 MTA2O94776 668 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 GOLGA6DP0CG33 693 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 ZBTB48P10074 688 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 HSPA6P17066 643 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 CHRNB2P17787 502 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 NLRP11P59045 1033 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 BPIFB4P59827 614 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 FSTL1Q12841 308 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 PPFIA1Q13136 1202 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 KCTD2Q14681 263 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 CFAP58Q5T655 872 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 ZNF677Q86XU0 584 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 EXOC8Q8IYI6 725 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 GLG1Q92896 1179 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 TRIM11Q96F44 468 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 SPON1Q9HCB6 807 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 GOLGA6AQ9NYA3 693 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 ZHX1Q9UKY1 873 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 COG5Q9UP83 839 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 UTP11Q9Y3A2 253 aaKnown RBP8.88□□□□□ -0.99
VAMP3-201ENST00000054666 STYXL1Q9Y6J8 313 aa8.88□□□□□ -0.99
VAMP3-201ENST00000054666 GSTTP1A0A1W2PQM5 241 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 SPOPO43791 374 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 PEX10O60683 326 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 HLA-DRAP01903 254 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 OSBPP22059 807 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 ACOT2P49753 483 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 EFNA5P52803 228 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 PPIL2Q13356 520 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms