RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 Tex35Q14BK3 207 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 Ccdc33Q3ULW6 985 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 Myo6Q64331 1265 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 Foxo6Q70KY4 559 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 Pcdhgb4Q91XX6 912 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 CactinQ9CS00 772 aaKnown RBP18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 Cnot8Q9D8X5 292 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 Gtf2h1Q9DBA9 547 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 IydQ9DCX8 285 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 Krt17Q9QWL7 433 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 Krt71Q9R0H5 524 aa18.15■□□□□ 0.5
Rpf1-203ENSMUST00000199079 Pus7B7ZNL8 666 aaKnown RBP18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Xbp1O35426 267 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 CaluO35887 315 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Ptp4a2O70274 167 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Bace1P56818 501 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Rps6P62754 249 aaKnown RBP18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Trim72Q1XH17 477 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Bpifb5Q3UQ05 490 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Xlr3bQ6P205 226 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Cep104Q80V31 926 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Gm5622Q810Q0 167 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Rccd1Q8BTU7 377 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Commd10Q8JZY2 202 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Rnf225Q9D7D1 332 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 IdeQ9JHR7 1019 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Ecel1Q9JMI0 775 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Rasgrp1Q9Z1S3 795 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Spata31d1aE9QA35 1336 aa18.14■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Gm21973F6WEZ7 68 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Casp14O89094 257 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Tarbp2P97473 365 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Zfp953Q3UPV7 304 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Abi3bpQ59IW6 1179 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Gm4952Q5FW57 296 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 TwistnbQ78WZ7 330 aaKnown RBP18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 AsphQ8BSY0 741 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 RalylQ8BTF8 293 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 BbxQ8VBW5 907 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Pagr1aQ99L02 253 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Fam133bQ9CVI2 245 aaKnown RBP18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Lman1Q9D0F3 517 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Smok2bQ9QYZ3 484 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Smok2aQ9QYZ6 504 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Mageb2A2AHM0 380 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Aoc3O70423 765 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 UrosP51163 265 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Ptgs2Q05769 604 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Zbed4Q80WQ9 1168 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Fbxo38Q8BMI0 1194 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Foxp3Q99JB6 429 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Sv2aQ9JIS5 742 aa18.13■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Gm5936A2BG95 728 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Gm5640A3KG49 728 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Kcnk16G5E845 292 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 SfnO70456 248 aaKnown RBP18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Tbx3P70324 741 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Igsf9Q05BQ1 1179 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Palb2Q3U0P1 1104 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Ddx49Q4FZF3 480 aaKnown RBP18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Sema5aQ62217 1077 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Uts2bQ765I1 113 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 B4galnt4Q766D5 1034 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Dusp4Q8BFV3 398 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Iffo1Q8BXL9 562 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Pop1Q8K205 1045 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Scrn2Q8VCA8 425 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Pcdha5Q91Y15 934 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Rab11fip1Q9D620 645 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 MesdQ9ERE7 224 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Usp29Q9ES63 869 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Orc3Q9JK30 715 aaKnown RBP18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Pdk2Q9JK42 407 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Ly6iQ9WU67 134 aa18.12■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Zscan4-ps3A0A1B0GRH6 506 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Zscan4-ps2A0A1C7CYU6 506 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Skint3A7TZF0 458 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Mdm4O35618 489 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Birc5O70201 140 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Atp9aO70228 1047 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Rnaseh1O70338 285 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Pde4aO89084 844 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Agbl1Q09M05 972 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Fam92bQ3V2J0 292 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Odr4Q4PJX1 447 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Adamts18Q4VC17 1219 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Ugt1a9Q62452 528 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Plk4Q64702 925 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Zcwpw1Q6IR42 630 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Dhx32Q8BZS9 744 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 A430089I19RikQ8C9W1 407 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 ItpkaQ8R071 459 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Mcur1Q9CXD6 340 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Nop56Q9D6Z1 580 aaKnown RBP18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Sucla2Q9Z2I9 463 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Arhgef10Q8C033 1345 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Srsf11E9Q6E5 511 aaKnown RBP18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Gm3182K7N6T8 263 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Kcna3P16390 528 aa18.11■□□□□ 0.49
Rpf1-203ENSMUST00000199079 Abi2P62484 446 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms