RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Myh14Q6URW6 2000 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Glt1d1A4FUP9 346 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Gpr161B2RPY5 545 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Wdr95D3Z7A8 784 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Olfr552E9Q545 317 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Art2bO35975 289 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 GnazO70443 355 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 MyocO70624 490 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Slc3a2P10852 526 aaKnown RBP14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Cyp11b2P15539 500 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Pfkfb2P70265 519 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Adcy8P97490 1249 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Igsf9Q05BQ1 1179 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Palb2Q3U0P1 1104 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Sh3gl3Q62421 347 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Atp2b4Q6Q477 1205 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Brd2Q7JJ13 798 aaKnown RBP14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ccdc137Q8R0K4 290 aaKnown RBP14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Med24Q99K74 987 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Hspbp1Q99P31 357 aaKnown RBP14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Chordc1Q9D1P4 331 aaKnown RBP14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 4921524L21RikQ9D5T2 438 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Serpina9Q9D7D2 418 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Htra2Q9JIY5 458 aa14.35□□□□□ -0.11
Nup88-201ENSMUST00000035283 Srsf11E9Q6E5 511 aaKnown RBP14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Zfp212G3X8R7 492 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Serpinb8O08800 374 aaKnown RBP14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Snx3O70492 162 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Sash1P59808 1230 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 LxnP70202 222 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Peg10Q7TN75 958 aaKnown RBP14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Trpa1Q8BLA8 1125 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Kctd6Q8BNL5 237 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Olfr1502Q8VG66 316 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 IdeQ9JHR7 1019 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ifi202Q9R002 445 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Lrrc10bG3XA50 292 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Pitpnm1O35954 1243 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Rrm1P07742 792 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ets2P15037 468 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ect2Q07139 913 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ccdc125Q5U465 500 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 SkiQ60698 725 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Btnl9Q8BJE2 536 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Slc9a9Q8BZ00 644 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Gmcl1Q920G9 524 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Sppl3Q9CUS9 384 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Setd6Q9CWY3 473 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Cnot8Q9D8X5 292 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Wdr83Q9DAJ4 315 aaKnown RBP14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ecel1Q9JMI0 775 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Cyth1Q9QX11 398 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mzf1S4R1L6 814 aa14.34□□□□□ -0.11
Nup88-201ENSMUST00000035283 Apol7bB1AQP7 369 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fam47eD3YWC7 402 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gm21962L7N280 338 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Rad51bO35719 350 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 PrlP06879 226 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Akr1b8P45377 316 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Trim43bP86448 445 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Vwa3aQ3UVV9 1148 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Apol7eQ3UZ24 369 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Odr4Q4PJX1 447 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Sema5aQ62217 1077 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ppp1r13bQ62415 1087 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Naif1Q6PFD7 327 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Kbtbd3Q8BHI4 607 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fbxl13Q8CDU4 790 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Rnf135Q9CWS1 417 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Cep72Q9D3R3 646 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Extl2Q9ES89 330 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Slc6a16A0A1L1SR47 742 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 CflarO35732 481 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Adcy7P51829 1099 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Frg1P97376 258 aaKnown RBP14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Slc10a4Q3UEZ8 437 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Tab3Q571K4 716 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Slc7a6osQ7TPE5 306 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Rab44Q8CB87 725 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fbxo43Q8CDI2 640 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Usp11Q99K46 921 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Usp29Q9ES63 869 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Scnn1bQ9WU38 638 aa14.33□□□□□ -0.12
Nup88-201ENSMUST00000035283 Unc5cO08747 931 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Atf2P16951 487 aaKnown RBP14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Nrp1P97333 923 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fam81aQ3UXZ6 364 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Large2Q5XPT3 690 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Msantd2Q6NZR2 559 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fbxl5Q8C2S5 690 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fam20aQ8CID3 541 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Bag2Q91YN9 210 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 PawrQ925B0 333 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 MesdQ9ERE7 224 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gucy1a3Q9ERL9 691 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Tmed2Q9R0Q3 201 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 GabreA2AMW3 916 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Itga9B8JK39 1036 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Trove2O08848 538 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Sar1aP36536 198 aa14.32□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms