RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	ACTRT1	Q8TDG2	376 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	TSSK1B	Q9BXA7	367 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	TRIM9	Q9C026	710 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	SPATA7	Q9P0W8	599 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	AGTPBP1	Q9UPW5	1226 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895		A6NHS1	94 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	ERVV-2	B6SEH9	535 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	PRPF3	O43395	683 aa	Known RBP	12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	TOM1L1	O75674	476 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	WFS1	O76024	890 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	CIAO1	O76071	339 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	RHOBTB3	O94955	611 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	OCM2	P0CE71	109 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	OCM	P0CE72	109 aa	Predicted RBP	12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	ACTN1	P12814	892 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	MMP13	P45452	471 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	GALC	P54803	685 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	LVRN	Q6Q4G3	990 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	CCDC89	Q8N998	374 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	GIPC3	Q8TF64	312 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	ARHGEF3	Q9NR81	526 aa		12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	TUBA8	Q9NY65	449 aa	Predicted RBP	12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	RBMX2	Q9Y388	322 aa	Known RBP	12.05	□□□□□ -0.48
SPIN3-231	ENST00000639895	EXOC3	O60645	756 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	RARG	P13631	454 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	ADD2	P35612	726 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	YWHAG	P61981	247 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	RBM17	Q96I25	401 aa	Known RBP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	SPATA16	Q9BXB7	569 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	RANBP17	Q9H2T7	1088 aa	Known RBP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	METTL14	Q9HCE5	456 aa	Known RBP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	AIPL1	Q9NZN9	384 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	ZNF212	Q9UDV6	495 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	CCDC195	A0A1B0GUA6	201 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	ZSCAN9	O15535	394 aa	Predicted RBP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	COQ9	O75208	318 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	RTP1	P59025	263 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	STAT4	Q14765	748 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	GSTA3	Q16772	222 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	TXNRD1	Q16881	649 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	SGSM1	Q2NKQ1	1148 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	NSMF	Q6X4W1	530 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	SGMS1	Q86VZ5	419 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	DNAJC10	Q8IXB1	793 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	MED15	Q96RN5	788 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	BTBD10	Q9BSF8	475 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	CDC42EP4	Q9H3Q1	356 aa	Known RBP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	CAAP1	Q9H8G2	361 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	TRPC5	Q9UL62	973 aa	Predicted RBP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	ZNF652	Q9Y2D9	606 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	SMCO2	A6NFE2	343 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	MIF4GD	A9UHW6	222 aa	Known RBP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	XPOT	O43592	962 aa	Known RBP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	PHF2	O75151	1096 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	HARS	P12081	509 aa	Known RBP	12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	MAN1A1	P33908	653 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	PRAME	P78395	509 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	MIGA2	Q7L4E1	593 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	PIGW	Q7Z7B1	504 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	NEK8	Q86SG6	692 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	LRRC6	Q86X45	466 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	PDZD8	Q8NEN9	1154 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	WDR37	Q9Y2I8	494 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	DTNA	Q9Y4J8	743 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	WDR17	Q8IZU2	1322 aa		12.04	□□□□□ -0.48
SPIN3-231	ENST00000639895	FAM237A	A0A1B0GTK4	181 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	GOLGA8S	H3BPF8	625 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	GOLGA8M	H3BSY2	632 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	CLIC2	O15247	247 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	BAG3	O95817	575 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	NFKBIA	P25963	317 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	ATXN3	P54252	364 aa	Predicted RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	AP1B1	Q10567	949 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	UBE3C	Q15386	1083 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	PARP6	Q2NL67	630 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	DNAL1	Q4LDG9	190 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	KHDC1	Q4VXA5	237 aa	Known RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	FIGN	Q5HY92	759 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	CRLF3	Q8IUI8	442 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	REXO1	Q8N1G1	1221 aa	Known RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	TPCN2	Q8NHX9	752 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	NAT14	Q8WUY8	206 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	RFFL	Q8WZ73	363 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	YIPF2	Q9BWQ6	316 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	OSBPL8	Q9BZF1	889 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	NEUROG2	Q9H2A3	272 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	GID8	Q9NWU2	228 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	SELENON	Q9NZV5	590 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	CPD	O75976	1380 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	SMIM31	A0A1B0GVY4	71 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	ZNF263	O14978	683 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	LDHA	P00338	332 aa	Known RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	TUB	P50607	506 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	BBS9	Q3SYG4	887 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	NXN	Q6DKJ4	435 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	ENAH	Q8N8S7	591 aa	Predicted RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	CKAP2	Q8WWK9	683 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	AK8	Q96MA6	479 aa		12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms