RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 YWHABP31946 246 aaKnown RBP12.11□□□□□ -0.47
VARS2-213ENST00000625423 CAP2P40123 477 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 DLGAP5Q15398 846 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 UGCGQ16739 394 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 TKFCQ3LXA3 575 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 CCDC105Q8IYK2 499 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 ZNF564Q8TBZ8 553 aaPredicted RBP12.11□□□□□ -0.47
VARS2-213ENST00000625423 C7orf43Q8WVR3 580 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 CD101Q93033 1021 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 TATDN2Q93075 761 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 CCDC127Q96BQ5 260 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 SAAL1Q96ER3 474 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 XPO6Q96QU8 1125 aaKnown RBP12.11□□□□□ -0.47
VARS2-213ENST00000625423 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
VARS2-213ENST00000625423 OSBPL7Q9BZF2 842 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 WNT8AQ9H1J5 351 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 AZI2Q9H6S1 392 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 AGO4Q9HCK5 861 aaKnown RBP12.11□□□□□ -0.47
VARS2-213ENST00000625423 CNTNAP1P78357 1384 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 ZNF536O15090 1300 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 ANKRD63C9JTQ0 380 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 PODXLO00592 558 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 CTNND1O60716 968 aaKnown RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 RAD17O75943 681 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 ICAM1P05362 532 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 GZMAP12544 262 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 FGFR4P22455 802 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 KCNJ1P48048 391 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 FMO1Q01740 532 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 SPRED3Q2MJR0 410 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 ERMARDQ5T6L9 678 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 NSMFQ6X4W1 530 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 CACNA2D3Q8IZS8 1091 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 SELENOSQ9BQE4 189 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 PCDHA3Q9Y5H8 950 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 GOLGA6L7A0A1B0GV03 622 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 CHN1P15882 459 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 CDR1P51861 262 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 IFI35P80217 286 aaPredicted RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 MRPS9P82933 396 aaKnown RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 CPXCR1Q8N123 301 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 TMEM174Q8WUU8 243 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 ZNF653Q96CK0 615 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 HOMER2Q9NSB8 354 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 MTRF1LQ9UGC7 380 aaKnown RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 RGS16O15492 202 aaPredicted RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 MTA2O94776 668 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 RARAP10276 462 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 DRD4P21917 467 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 ADSSP30520 456 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 COILP38432 576 aaPredicted RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 PTGER2P43116 358 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 MNAT1P51948 309 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 MFAP3P55082 362 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 MTMR1Q13613 665 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 SNRNP35Q16560 246 aaKnown RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 FAM102BQ5T8I3 360 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 GKAP1Q5VSY0 366 aaPredicted RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 SLC13A5Q86YT5 568 aaPredicted RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 CLEC4DQ8WXI8 215 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 PGM2Q96G03 612 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 KIFC3Q9BVG8 833 aa12.1□□□□□ -0.47
VARS2-213ENST00000625423 PDGFDQ9GZP0 370 aaPredicted RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
VARS2-213ENST00000625423 GGPS1O95749 300 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 ALAS1P13196 640 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 CYP11B1P15538 503 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
VARS2-213ENST00000625423 SLCO1A2P46721 670 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 PLA2G4FQ68DD2 849 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 RSBN1LQ6PCB5 846 aaPredicted RBP12.09□□□□□ -0.47
VARS2-213ENST00000625423 FLAD1Q8NFF5 587 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 SHC3Q92529 594 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 CHMP6Q96FZ7 201 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 DEFB129Q9H1M3 183 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 TOPORSQ9NS56 1045 aaPredicted RBP12.09□□□□□ -0.47
VARS2-213ENST00000625423 MTUS1Q9ULD2 1270 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 UBIAD1Q9Y5Z9 338 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 ASTN2O75129 1339 aaPredicted RBP12.09□□□□□ -0.47
VARS2-213ENST00000625423 MAPK13O15264 365 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 C21orf2O43822 256 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 CYP1A2P05177 515 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 EPS8L3Q8TE67 593 aaKnown RBP12.09□□□□□ -0.47
VARS2-213ENST00000625423 MORC4Q8TE76 937 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 FAM129AQ9BZQ8 928 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 ADAM7Q9H2U9 754 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 PARP2Q9UGN5 583 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 DNM1LO00429 736 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 ATP2C2O75185 946 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
VARS2-213ENST00000625423 MMP13P45452 471 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 SF3A3Q12874 501 aaKnown RBP eCLIP12.09□□□□□ -0.471e-6■□□□□ 9.9
VARS2-213ENST00000625423 DRP2Q13474 957 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 SIX1Q15475 284 aaPredicted RBP12.09□□□□□ -0.47
VARS2-213ENST00000625423 KRT39Q6A163 491 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 ARMC9Q7Z3E5 817 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms