RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 BTBD6Q96KE9 485 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 WRAP73Q9P2S5 460 aaPredicted RBP21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 GJB6O95452 261 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 COPS2P61201 443 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 CALCOCO2Q13137 446 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 PPP2R5CQ13362 524 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 EPC2Q52LR7 807 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 LRCH2Q5VUJ6 765 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 KIRREL3Q8IZU9 778 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 LRRC19Q9H756 370 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 NOCTQ9UK39 431 aaKnown RBP21■□□□□ 0.95
PDLIM3-212ENST00000620787 F5H6K3 240 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 ECM2O94769 699 aaPredicted RBP21■□□□□ 0.95
PDLIM3-212ENST00000620787 SGPL1O95470 568 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 PPP3CAQ08209 521 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 CERKLQ49MI3 558 aaPredicted RBP21■□□□□ 0.95
PDLIM3-212ENST00000620787 NUGGCQ68CJ6 796 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 RHBDF2Q6PJF5 856 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 NOP9Q86U38 636 aaKnown RBP21■□□□□ 0.95
PDLIM3-212ENST00000620787 GBP7Q8N8V2 638 aaPredicted RBP21■□□□□ 0.95
PDLIM3-212ENST00000620787 VTI1AQ96AJ9 217 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 COA1Q9GZY4 146 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 WHRNQ9P202 907 aa21■□□□□ 0.95
PDLIM3-212ENST00000620787 SPOPO43791 374 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 NAA25Q14CX7 972 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 SYCP3Q8IZU3 236 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 ZNF564Q8TBZ8 553 aaPredicted RBP20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 EPS8L1Q8TE68 723 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 CKAP2Q8WWK9 683 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 SLCO2A1Q92959 643 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 KAT5Q92993 513 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 THOC1Q96FV9 657 aaKnown RBP20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 CRAMP1Q96RY5 1269 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 CTNNAL1Q9UBT7 734 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 O00370 1275 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 KRT16P08779 473 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 GZMAP12544 262 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 CHKAP35790 457 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 ICA1Q05084 483 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 MKRN4PQ13434 485 aaPredicted RBP20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 SPATA21Q7Z572 469 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 PRCCQ92733 491 aaPredicted RBP20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 SLC5A5Q92911 643 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 FAXDC2Q96IV6 333 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 NUP85Q9BW27 656 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 PRKAG3Q9UGI9 489 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 PNMA3Q9UL41 463 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 ARL2BPQ9Y2Y0 163 aa20.99■□□□□ 0.95
PDLIM3-212ENST00000620787 FOXO6A8MYZ6 492 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 PIK3CDO00329 1044 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 NDUFB10O96000 172 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 DLATP10515 647 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 PRELPP51888 382 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 KRT17Q04695 432 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 IKQ13123 557 aaPredicted RBP20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 MPP2Q14168 576 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 MYBPC2Q14324 1141 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 C1orf220Q5T0J3 134 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 HHIPL2Q6UWX4 724 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 PSPC1Q8WXF1 523 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 MLXIPLQ9NP71 852 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 ARHGEF3Q9NR81 526 aa20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 NOP53Q9NZM5 478 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-212ENST00000620787 A8MUI8 341 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 CYP1A2P05177 515 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 PAX7P23759 505 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 FAM196AQ6ZSG2 479 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 INTS8Q75QN2 995 aaKnown RBP20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 KIF2BQ8N4N8 673 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 FITM2Q8N6M3 262 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 ANKRD42Q8N9B4 389 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 GMCL1P1Q8NEA9 526 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 KLHL29Q96CT2 875 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 GMCL1Q96IK5 515 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 PCIF1Q9H4Z3 704 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 KCND2Q9NZV8 630 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 TISP43B9A030 160 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 GH1P01241 217 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 ATP5DP30049 168 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 HOXA10P31260 410 aaPredicted RBP20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 GCLMP48507 274 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 VAMP7P51809 220 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 RWDD2BP57060 319 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 ASRGL1Q7L266 308 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 DAW1Q8N136 415 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 TEKT1Q969V4 418 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 NACC1Q96RE7 527 aa20.97■□□□□ 0.95
PDLIM3-212ENST00000620787 DDTLA6NHG4 134 aaPredicted RBP20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 P4HA2O15460 535 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 CLDN3O15551 220 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 HIP1RO75146 1068 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 CGB2Q6NT52 195 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 FAM71AQ8IYT1 594 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 GDAP1Q8TB36 358 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 C1orf54Q8WWF1 131 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 RXFP1Q9HBX9 757 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 KCNK9Q9NPC2 374 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 ACP6Q9NPH0 428 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 FSCN2O14926 492 aa20.96■□□□□ 0.95
PDLIM3-212ENST00000620787 MUTP22033 750 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms