RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 RPS6KC1Q96S38 1066 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 RPAP3Q9H6T3 665 aaPredicted RBP5.97□□□□□ -1.45
CPNE4-214ENST00000617767 KCNMB3Q9NPA1 279 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 EMILIN3Q9NT22 766 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 TCEAL9Q9UHQ7 104 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 USP20Q9Y2K6 914 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 DIS3Q9Y2L1 958 aaKnown RBP5.97□□□□□ -1.45
CPNE4-214ENST00000617767 TMED5Q9Y3A6 229 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 ADGRG1Q9Y653 693 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 USH1CQ9Y6N9 552 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 DOCK5Q9H7D0 1870 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 ITIH6Q6UXX5 1313 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 LGALS16A8MUM7 142 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 E7EVH7 732 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 hCG_1984214I3L0E3 225 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 ENDOUP21128 410 aaKnown RBP5.97□□□□□ -1.45
CPNE4-214ENST00000617767 ENPP1P22413 925 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 HMGB2P26583 209 aaKnown RBP5.97□□□□□ -1.45
CPNE4-214ENST00000617767 CASP4P49662 377 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 PTGISQ16647 500 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 FKBP15Q5T1M5 1219 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 CACNA2D4Q7Z3S7 1137 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 CNGA4Q8IV77 575 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 SLC35F6Q8N357 371 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 ARL8AQ96BM9 186 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 CLMNQ96JQ2 1002 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 MAELQ96JY0 434 aaKnown RBP5.97□□□□□ -1.45
CPNE4-214ENST00000617767 TAAR1Q96RJ0 339 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 CCDC68Q9H2F9 335 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 SYNCQ9H7C4 482 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 DMAP1Q9NPF5 467 aaPredicted RBP5.97□□□□□ -1.45
CPNE4-214ENST00000617767 RABGAP1Q9Y3P9 1069 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 HEY1Q9Y5J3 304 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 ATRNL1Q5VV63 1379 aa5.97□□□□□ -1.45
CPNE4-214ENST00000617767 MYO3BQ8WXR4 1341 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 BICDL2A1A5D9 508 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 TBCAO75347 108 aaKnown RBP5.96□□□□□ -1.45
CPNE4-214ENST00000617767 NPM3O75607 178 aaKnown RBP5.96□□□□□ -1.45
CPNE4-214ENST00000617767 CCDC166P0CW27 439 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 BCRP11274 1271 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 NR2F2P24468 414 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 VARSP26640 1264 aaKnown RBP5.96□□□□□ -1.45
CPNE4-214ENST00000617767 PBX1P40424 430 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 CYP2J2P51589 502 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 RPS6P62753 249 aaKnown RBP5.96□□□□□ -1.45
CPNE4-214ENST00000617767 SPAG1Q07617 926 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 MKRN4PQ13434 485 aaPredicted RBP5.96□□□□□ -1.45
CPNE4-214ENST00000617767 TTLL12Q14166 644 aaPredicted RBP5.96□□□□□ -1.45
CPNE4-214ENST00000617767 MIIPQ5JXC2 388 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 LONP2Q86WA8 852 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 CCHCR1Q8TD31 782 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 SCFD1Q8WVM8 642 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 ZNF653Q96CK0 615 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 DHTKD1Q96HY7 919 aaPredicted RBP5.96□□□□□ -1.45
CPNE4-214ENST00000617767 MRIQ9BWK5 157 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 NDST4Q9H3R1 872 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 PCIF1Q9H4Z3 704 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 DLGAP2Q9P1A6 1054 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 SSX2IPQ9Y2D8 614 aa5.96□□□□□ -1.45
CPNE4-214ENST00000617767 TMA7Q9Y2S6 64 aaKnown RBP5.96□□□□□ -1.45
CPNE4-214ENST00000617767 SP100P23497 879 aaPredicted RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 PCK1P35558 622 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 SREBF1P36956 1147 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 POLR2FP61218 127 aaKnown RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 SKOR1P84550 965 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 GSTM4Q03013 218 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 ITIH3Q06033 890 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 SPIRE1Q08AE8 756 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 TNIP1Q15025 636 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 TMEM119Q4V9L6 283 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 PPP1R18Q6NYC8 613 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 DUS1LQ6P1R4 473 aaKnown RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 GJB7Q6PEY0 223 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 TBC1D1Q86TI0 1168 aaPredicted RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 TEX9Q8N6V9 391 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 AGBL3Q8NEM8 1001 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 PPP1R14BQ96C90 147 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 RNPC3Q96LT9 517 aaKnown RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 CCDC43Q96MW1 224 aaKnown RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 TEPSINQ96N21 525 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 TSG101Q99816 390 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 KIFC3Q9BVG8 833 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 SEZ6LQ9BYH1 1024 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 MTFR1LQ9H019 292 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 LUC7LQ9NQ29 371 aaKnown RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 GPRC5CQ9NQ84 441 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 PFDN4Q9NQP4 134 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 STK17AQ9UEE5 414 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 ZNF711Q9Y462 761 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 HTTP42858 3142 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 GREB1LQ9C091 1923 aaPredicted RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 RCCD1A6NED2 376 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 PHF20L1A8MW92 1017 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 USO1O60763 962 aaKnown RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 ATP9AO75110 1047 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 FAM13AO94988 1023 aa5.96□□□□□ -1.46
CPNE4-214ENST00000617767 TROVE2P10155 538 aaKnown RBP eCLIP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 HSPA8P11142 646 aaKnown RBP5.96□□□□□ -1.46
CPNE4-214ENST00000617767 ITGB5P18084 799 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms