RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 SLC29A2Q14542 456 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 COG2Q14746 738 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 BTNL9Q6UXG8 535 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 C1orf186Q6ZWK4 172 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 PIGOQ8TEQ8 1089 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 ALG3Q92685 438 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 KLRG1Q96E93 195 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 WRNIP1Q96S55 665 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 TMEM109Q9BVC6 243 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 IKZF4Q9H2S9 585 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 ADAM7Q9H2U9 754 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 INTS9Q9NV88 658 aaKnown RBP11.67□□□□□ -0.54
VPS4B-206ENST00000591475 DMAC2Q9NW81 257 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 TAS2R14Q9NYV8 317 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 GRHL1Q9NZI5 618 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 TMOD4Q9NZQ9 345 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 PCYOX1Q9UHG3 505 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 ALG6Q9Y672 507 aa11.67□□□□□ -0.54
VPS4B-206ENST00000591475 RPTORQ8N122 1335 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 ADM5C9JUS6 153 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 TRIM49P0CI25 452 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 TRIM49CP0CI26 452 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 BCRP11274 1271 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 EZRP15311 586 aaKnown RBP11.66□□□□□ -0.54
VPS4B-206ENST00000591475 CTNNA2P26232 953 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 SLC8A1P32418 973 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 NF2P35240 595 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 RPL21P46778 160 aaKnown RBP11.66□□□□□ -0.54
VPS4B-206ENST00000591475 SNAP25P60880 206 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 CTTNQ14247 550 aaKnown RBP11.66□□□□□ -0.54
VPS4B-206ENST00000591475 TCEAL1Q15170 157 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 PIGWQ7Z7B1 504 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 VTI1AQ96AJ9 217 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 C18orf8Q96DM3 657 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 GMCL1Q96IK5 515 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 ZSWIM1Q9BR11 485 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 NSRP1Q9H0G5 558 aaKnown RBP11.66□□□□□ -0.54
VPS4B-206ENST00000591475 CCDC134Q9H6E4 229 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 AGPAT3Q9NRZ7 376 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 SAMD15Q9P1V8 674 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 CTTNBP2NLQ9P2B4 639 aa11.66□□□□□ -0.54
VPS4B-206ENST00000591475 A0A1W2PRG0 241 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 SMIM23A6NLE4 172 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 MGRN1O60291 552 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 IFI35P80217 286 aaPredicted RBP11.65□□□□□ -0.54
VPS4B-206ENST00000591475 IKQ13123 557 aaPredicted RBP11.65□□□□□ -0.54
VPS4B-206ENST00000591475 SLMAPQ14BN4 828 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 SEL1L2Q5TEA6 688 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 SYDE2Q5VT97 1194 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 ZNF720Q7Z2F6 126 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 FAM228AQ86W67 206 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 CEP57Q86XR8 500 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 PALB2Q86YC2 1186 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 TPH2Q8IWU9 490 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 FAM178BQ8IXR5 827 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 LRRC34Q8IZ02 419 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 SCYL3Q8IZE3 742 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 PRELID2Q8N945 189 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 DYDC2Q96IM9 177 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 RUNDC3BQ96NL0 473 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 RPS6KC1Q96S38 1066 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 HSD17B14Q9BPX1 270 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 FOXN3O00409 490 aaPredicted RBP11.65□□□□□ -0.54
VPS4B-206ENST00000591475 LRRN2O75325 713 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 SLITRK3O94933 977 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 ALAS1P13196 640 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 ECE1P42892 770 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 GPC5P78333 572 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 ELF3P78545 371 aaPredicted RBP11.65□□□□□ -0.54
VPS4B-206ENST00000591475 BFSP1Q12934 665 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 PHLDB3Q6NSJ2 640 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 AADACL2Q6P093 401 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 CCDC137Q6PK04 289 aaKnown RBP11.65□□□□□ -0.54
VPS4B-206ENST00000591475 TAOK1Q7L7X3 1001 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 KSR1Q8IVT5 923 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 CYP2W1Q8TAV3 490 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 MORC4Q8TE76 937 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 SEMA4AQ9H3S1 761 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 RRAGCQ9HB90 399 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 PICK1Q9NRD5 415 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS4B-206ENST00000591475 ODF2LQ9ULJ1 636 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
VPS4B-206ENST00000591475 SSC5DA1L4H1 1573 aa11.65□□□□□ -0.55
VPS4B-206ENST00000591475 IGLV3-22A0A075B6J6 115 aa11.64□□□□□ -0.55
VPS4B-206ENST00000591475 EXOC3O60645 756 aa11.64□□□□□ -0.55
VPS4B-206ENST00000591475 USP2O75604 605 aaPredicted RBP11.64□□□□□ -0.55
VPS4B-206ENST00000591475 NDUFB10O96000 172 aa11.64□□□□□ -0.55
VPS4B-206ENST00000591475 FTLP02792 175 aaPredicted RBP11.64□□□□□ -0.55
VPS4B-206ENST00000591475 VIMP08670 466 aaKnown RBP11.64□□□□□ -0.55
VPS4B-206ENST00000591475 RARGP13631 454 aa11.64□□□□□ -0.55
VPS4B-206ENST00000591475 HOXA13P31271 388 aaPredicted RBP11.64□□□□□ -0.55
VPS4B-206ENST00000591475 ELF1P32519 619 aa11.64□□□□□ -0.55
VPS4B-206ENST00000591475 ZNF131P52739 623 aa11.64□□□□□ -0.55
VPS4B-206ENST00000591475 PPP1R7Q15435 360 aa11.64□□□□□ -0.55
VPS4B-206ENST00000591475 LRCH2Q5VUJ6 765 aa11.64□□□□□ -0.55
VPS4B-206ENST00000591475 TTC27Q6P3X3 843 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms