RNA–Protein interactions for RNA: ENST00000589872.1

NBR1-205, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBR1, Length 3,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-205ENST00000589872 ACVR2BQ13705 512 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 CBWD6Q4V339 395 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 CBWD3Q5JTY5 395 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 CBWD5Q5RIA9 395 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 ZNF746Q6NUN9 644 aaPredicted RBP13.25□□□□□ -0.29
NBR1-205ENST00000589872 BORCS6Q96GS4 357 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 DDX60LQ5H9U9 1706 aaKnown RBP13.25□□□□□ -0.29
NBR1-205ENST00000589872 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
NBR1-205ENST00000589872 WDR4P57081 412 aaKnown RBP13.25□□□□□ -0.29
NBR1-205ENST00000589872 TRIP13Q15645 432 aaPredicted RBP13.25□□□□□ -0.29
NBR1-205ENST00000589872 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 CATSPER3Q86XQ3 398 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 GALNT15Q8N3T1 639 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 UBL4BQ8N7F7 174 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 C1orf54Q8WWF1 131 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 CAMKK2Q96RR4 588 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 RUSC1Q9BVN2 902 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 DENND2DQ9H6A0 471 aaPredicted RBP13.25□□□□□ -0.29
NBR1-205ENST00000589872 METTL14Q9HCE5 456 aaKnown RBP13.25□□□□□ -0.29
NBR1-205ENST00000589872 SLCO1B3Q9NPD5 702 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 TYW1Q9NV66 732 aaKnown RBP13.25□□□□□ -0.29
NBR1-205ENST00000589872 PASKQ96RG2 1323 aa13.25□□□□□ -0.29
NBR1-205ENST00000589872 TGFB1I1O43294 461 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 RTN3O95197 1032 aaPredicted RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 GCNT3O95395 438 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 HSPA6P17066 643 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 SMARCA1P28370 1054 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 POLGP54098 1239 aaPredicted RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 KLC1Q07866 573 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 TRAF1Q13077 416 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 CALCOCO2Q13137 446 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 DNAJC3Q13217 504 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 TMEM63BQ5T3F8 832 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 SEL1L2Q5TEA6 688 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 CYFIP1Q7L576 1253 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 SLC13A5Q86YT5 568 aaPredicted RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 AGGF1Q8N302 714 aaeCLIP13.24□□□□□ -0.29
NBR1-205ENST00000589872 DNAJC9Q8WXX5 260 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 FOXN3O00409 490 aaPredicted RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 FTLP02792 175 aaPredicted RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 TRIM49P0CI25 452 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 TRIM49CP0CI26 452 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 SESN3P58005 492 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 MKRN3Q13064 507 aaKnown RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 COG2Q14746 738 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 SF3B3Q15393 1217 aaKnown RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 RBM26Q5T8P6 1007 aaKnown RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 ENDOVQ8N8Q3 282 aaKnown RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 DNAJC18Q9H819 358 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 NAALADL1Q9UQQ1 740 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 GTPBP10A4D1E9 387 aaKnown RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 TTC4O95801 387 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 LDHBP07195 334 aaKnown RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 DLATP10515 647 aaKnown RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 BAG6P46379 1132 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 GCLCP48506 637 aaPredicted RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 LBRQ14739 615 aaKnown RBP13.24□□□□□ -0.29
NBR1-205ENST00000589872 CYP1B1Q16678 543 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 FOXB2Q5VYV0 432 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 ARMC3Q5W041 872 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 TTBK2Q6IQ55 1244 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 RHBDF2Q6PJF5 856 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.24□□□□□ -0.29
NBR1-205ENST00000589872 CCDC24Q8N4L8 307 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
NBR1-205ENST00000589872 FRMPD4Q14CM0 1322 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 MIF4GDA9UHW6 222 aaKnown RBP13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 E7ENQ6 273 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
NBR1-205ENST00000589872 SPAG7O75391 227 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 ECEL1O95672 775 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 ACADSP16219 412 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 FMO5P49326 533 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 KRT17Q04695 432 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 SLC5A9Q2M3M2 681 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 SGSM1Q2NKQ1 1148 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 RFWD3Q6PCD5 774 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 USP17L6PQ6QN14 398 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 BICDL1Q6ZP65 573 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 C16orf86Q6ZW13 317 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 FAM186BQ8IYM0 893 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 FAM136AQ96C01 138 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 JMJD4Q9H9V9 463 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 NKIRAS1Q9NYS0 192 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 WDR35Q9P2L0 1181 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 RPL13P26373 211 aaKnown RBP13.23□□□□□ -0.29
NBR1-205ENST00000589872 ATP5DP30049 168 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 ALDH3A1P30838 453 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 SETDB1Q15047 1291 aa13.23□□□□□ -0.29
NBR1-205ENST00000589872 CLUL1Q15846 466 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms