RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 KIAA0391O15091 583 aaKnown RBP16.58■□□□□ 0.24
ATG4D-211ENST00000589753 NR3C1P04150 777 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 ACRP10323 421 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 RPL13P26373 211 aaKnown RBP16.58■□□□□ 0.24
ATG4D-211ENST00000589753 RAB27AP51159 221 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 IKBKEQ14164 716 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 TTI2Q6NXR4 508 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 FOXR2Q6PJQ5 311 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 RTN4RL1Q86UN2 441 aaPredicted RBP16.58■□□□□ 0.24
ATG4D-211ENST00000589753 SLC9A9Q8IVB4 645 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 TMEM174Q8WUU8 243 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 LINC01599Q8WXQ3 324 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 TRAIPQ9BWF2 469 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 TSPYL2Q9H2G4 693 aaPredicted RBP16.58■□□□□ 0.24
ATG4D-211ENST00000589753 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 C1orf112Q9NSG2 853 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 FAM105AQ9NUU6 356 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 HSPBP1Q9NZL4 362 aa16.58■□□□□ 0.24
ATG4D-211ENST00000589753 AGO2Q9UKV8 859 aaKnown RBP16.58■□□□□ 0.24
ATG4D-211ENST00000589753 ENPP3O14638 875 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 OGTO15294 1046 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 CAVIN2O95810 425 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 LDHAP00338 332 aaKnown RBP16.57■□□□□ 0.24
ATG4D-211ENST00000589753 ACTN1P12814 892 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 NR2F2P24468 414 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 CYP2J2P51589 502 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 ADAM9Q13443 819 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 MYBPC2Q14324 1141 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 SLC24A5Q71RS6 500 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 MED15Q96RN5 788 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 DUSP9Q99956 384 aaKnown RBP16.57■□□□□ 0.24
ATG4D-211ENST00000589753 BPIFA3Q9BQP9 254 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 DMAC2Q9NW81 257 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 IPPQ9Y573 584 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 PCDHB2Q9Y5E7 798 aa16.57■□□□□ 0.24
ATG4D-211ENST00000589753 MKI67P46013 3256 aaKnown RBP16.56■□□□□ 0.24
ATG4D-211ENST00000589753 A0A0U1RQF3 1178 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 ABHD14A-ACY1A0A1B0GW23 586 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 C9IYK1 514 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 CETN3O15182 167 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 EXOC3O60645 756 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 EFCAB14O75071 495 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 FGBP02675 491 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 SKIP12755 728 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 ZNF165P49910 485 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 FKBP3Q00688 224 aaKnown RBP16.56■□□□□ 0.24
ATG4D-211ENST00000589753 HSP90AA2PQ14568 343 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-211ENST00000589753 KYAT1Q16773 422 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 TPD52L1Q16890 204 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-211ENST00000589753 PSRC1Q6PGN9 363 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-211ENST00000589753 C16orf59Q7L2K0 433 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 THNSL1Q8IYQ7 743 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 GPD1LQ8N335 351 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 CSGALNACT2Q8N6G5 542 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 XXYLT1Q8NBI6 393 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 ENOX1Q8TC92 643 aaKnown RBP16.56■□□□□ 0.24
ATG4D-211ENST00000589753 NOC3LQ8WTT2 800 aaKnown RBP16.56■□□□□ 0.24
ATG4D-211ENST00000589753 SAAL1Q96ER3 474 aa16.56■□□□□ 0.24
ATG4D-211ENST00000589753 GOLGA8IPA6NC78 632 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 GOLGA8JA6NMD2 632 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 EXTL3O43909 919 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 FAM189A1O60320 539 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 ZNF623O75123 536 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 BAIAP3O94812 1187 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 GRM5P41594 1212 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 EPHB4P54760 987 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 OSTNP61366 133 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 FAM189BP81408 668 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 SEZ6Q53EL9 994 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 SPATA1Q5VX52 437 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 ZNF365Q70YC5 407 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 ZC3H3Q8IXZ2 948 aaKnown RBP16.55■□□□□ 0.24
ATG4D-211ENST00000589753 HACE1Q8IYU2 909 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 CEP120Q8N960 986 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 SMG8Q8ND04 991 aaKnown RBP16.55■□□□□ 0.24
ATG4D-211ENST00000589753 ZSWIM2Q8NEG5 633 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 FAM213AQ9BRX8 229 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 CCDC94Q9BW85 323 aaPredicted RBP16.55■□□□□ 0.24
ATG4D-211ENST00000589753 NXF3Q9H4D5 531 aaKnown RBP16.55■□□□□ 0.24
ATG4D-211ENST00000589753 KIAA1586Q9HCI6 787 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 HES2Q9Y543 173 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 TET1Q8NFU7 2136 aa16.55■□□□□ 0.24
ATG4D-211ENST00000589753 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-211ENST00000589753 FGFR1OPO95684 399 aaKnown RBP16.54■□□□□ 0.24
ATG4D-211ENST00000589753 STAG3L1P0CL83 205 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 IBSPP21815 317 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-211ENST00000589753 TNFSF9P41273 254 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 MAGEA10P43363 369 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-211ENST00000589753 ACOT2P49753 483 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 MYL5Q02045 173 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 TMEM240Q5SV17 173 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 ZBTB41Q5SVQ8 909 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 CEP135Q66GS9 1140 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 LRRC55Q6ZSA7 311 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 OTOP2Q7RTS6 562 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 MRPL10Q7Z7H8 261 aaKnown RBP16.54■□□□□ 0.24
ATG4D-211ENST00000589753 ECHDC2Q86YB7 292 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 AOPEPQ8N6M6 819 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 PGBD4Q96DM1 585 aa16.54■□□□□ 0.24
ATG4D-211ENST00000589753 EEF2KMTQ96G04 330 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms