RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 FUT10Q6P4F1 479 aa17.05■□□□□ 0.32
IFT20-216ENST00000588477 PARM1Q6UWI2 310 aa17.05■□□□□ 0.32
IFT20-216ENST00000588477 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
IFT20-216ENST00000588477 MBOAT7Q96N66 472 aa17.05■□□□□ 0.32
IFT20-216ENST00000588477 NCOA5Q9HCD5 579 aaKnown RBP17.05■□□□□ 0.32
IFT20-216ENST00000588477 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.05■□□□□ 0.32
IFT20-216ENST00000588477 FNIP2Q9P278 1114 aa17.05■□□□□ 0.32
IFT20-216ENST00000588477 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
IFT20-216ENST00000588477 DDX25Q9UHL0 483 aaKnown RBP17.05■□□□□ 0.32
IFT20-216ENST00000588477 ASAP2O43150 1006 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.32
IFT20-216ENST00000588477 ZMYND10O75800 440 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 FSHRP23945 695 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 AXLP30530 894 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 RFC5P40937 340 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 NOTUMQ6P988 496 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 BLOC1S2Q6QNY1 142 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 MOXD1Q6UVY6 613 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 GRASPQ7Z6J2 395 aaPredicted RBP17.04■□□□□ 0.32
IFT20-216ENST00000588477 FERMT3Q86UX7 667 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 BLIDQ8IZY5 108 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 TCP11Q8WWU5 503 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 RABGGTAQ92696 567 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 CNTNAP3BQ96NU0 1288 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 CNTNAP3Q9BZ76 1288 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 SPATA6Q9NWH7 488 aaPredicted RBP17.04■□□□□ 0.32
IFT20-216ENST00000588477 NCDNQ9UBB6 729 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 ZFP37Q9Y6Q3 630 aaPredicted RBP17.04■□□□□ 0.32
IFT20-216ENST00000588477 CACNA1BQ00975 2339 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 RALGAPA1Q6GYQ0 2036 aa17.04■□□□□ 0.32
IFT20-216ENST00000588477 KANSL1LA0AUZ9 987 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 M0R2N6 131 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 LAMTOR5O43504 91 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 SLC37A4O43826 429 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 TSPAN1O60635 241 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 KRT37O76014 449 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 P4HBP07237 508 aaKnown RBP17.03■□□□□ 0.32
IFT20-216ENST00000588477 PPP2R5CQ13362 524 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 EMC2Q15006 297 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 BMP2KLQ5H9B9 411 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 VARS2Q5ST30 1063 aaKnown RBP17.03■□□□□ 0.32
IFT20-216ENST00000588477 BCO2Q9BYV7 579 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 CSRNP2Q9H175 543 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 ADAM28Q9UKQ2 775 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 MTF2Q9Y483 593 aaPredicted RBP17.03■□□□□ 0.32
IFT20-216ENST00000588477 PPME1Q9Y570 386 aa17.03■□□□□ 0.32
IFT20-216ENST00000588477 AKAP5P24588 427 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 PDIA3P30101 505 aaKnown RBP17.02■□□□□ 0.32
IFT20-216ENST00000588477 YWHABP31946 246 aaKnown RBP17.02■□□□□ 0.32
IFT20-216ENST00000588477 NTHL1P78549 312 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 NCBP1Q09161 790 aaKnown RBP17.02■□□□□ 0.32
IFT20-216ENST00000588477 UBXN2BQ14CS0 331 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 INF2Q27J81 1249 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 ZNF528Q3MIS6 628 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 XKR9Q5GH70 373 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 PRSS55Q6UWB4 352 aaPredicted RBP17.02■□□□□ 0.32
IFT20-216ENST00000588477 GPR65Q8IYL9 337 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 MTRQ99707 1265 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 AGXT2Q9BYV1 514 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 TRIM6Q9C030 488 aaPredicted RBP17.02■□□□□ 0.32
IFT20-216ENST00000588477 NXF3Q9H4D5 531 aaKnown RBP17.02■□□□□ 0.32
IFT20-216ENST00000588477 FBXO4Q9UKT5 387 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 VAV3Q9UKW4 847 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 CDH7Q9ULB5 785 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 GIT1Q9Y2X7 761 aa17.02■□□□□ 0.32
IFT20-216ENST00000588477 INO80B-WBP1J3KQ70 363 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 ZBTB39O15060 712 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 TADA2AO75478 443 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 PTENP60484 403 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 CREMQ03060 361 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 CSTF1Q05048 431 aaKnown RBP17.01■□□□□ 0.31
IFT20-216ENST00000588477 SSRP1Q08945 709 aaKnown RBP17.01■□□□□ 0.31
IFT20-216ENST00000588477 PCBP1Q15365 356 aaKnown RBP eCLIP17.01■□□□□ 0.31
IFT20-216ENST00000588477 MLF2Q15773 248 aaPredicted RBP17.01■□□□□ 0.31
IFT20-216ENST00000588477 SLC44A4Q53GD3 710 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 OTUD6AQ7L8S5 288 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 SKAP1Q86WV1 359 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 C4orf19Q8IY42 314 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 TRIM22Q8IYM9 498 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 FBXL16Q8N461 479 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 GSTCDQ8NEC7 633 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 BORCS6Q96GS4 357 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 LXNQ9BS40 222 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 DDX23Q9BUQ8 820 aaKnown RBP17.01■□□□□ 0.31
IFT20-216ENST00000588477 CACNG4Q9UBN1 327 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 POLIQ9UNA4 740 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 SNX14Q9Y5W7 946 aa17.01■□□□□ 0.31
IFT20-216ENST00000588477 NCOR2Q9Y618 2525 aa17■□□□□ 0.31
IFT20-216ENST00000588477 FAM170BA6NMN3 283 aa17■□□□□ 0.31
IFT20-216ENST00000588477 SPTLC1O15269 473 aa17■□□□□ 0.31
IFT20-216ENST00000588477 ARF4P18085 180 aaPredicted RBP17■□□□□ 0.31
IFT20-216ENST00000588477 CD72P21854 359 aa17■□□□□ 0.31
IFT20-216ENST00000588477 RPS6KB1P23443 525 aa17■□□□□ 0.31
IFT20-216ENST00000588477 PRKCQQ04759 706 aa17■□□□□ 0.31
IFT20-216ENST00000588477 RTP2Q5QGT7 225 aa17■□□□□ 0.31
IFT20-216ENST00000588477 PPM1LQ5SGD2 360 aa17■□□□□ 0.31
IFT20-216ENST00000588477 MTSS1LQ765P7 747 aa17■□□□□ 0.31
IFT20-216ENST00000588477 CDR2LQ86X02 465 aaPredicted RBP17■□□□□ 0.31
IFT20-216ENST00000588477 HACE1Q8IYU2 909 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms