RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 CACNA1GO43497 2377 aa9.34□□□□□ -0.91
NEDD4L-218ENST00000587547 LINC01565O15544 149 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 MBD3O95983 291 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 ADH1BP00325 375 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 PDGFBP01127 241 aaPredicted RBP9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 KRT18P05783 430 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 CKBP12277 381 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 XRCC6P12956 609 aaKnown RBP eCLIP9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 PTMSP20962 102 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 RARRES1P49788 294 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 POLGP54098 1239 aaPredicted RBP9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 RAD51AP2Q09MP3 1159 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 TBC1D8BQ0IIM8 1120 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 SNW1Q13573 536 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 IKBKEQ14164 716 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 ZNF484Q5JVG2 852 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 TRAF7Q6Q0C0 670 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 KRBA2Q6ZNG9 492 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 SV2BQ7L1I2 683 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 MAEAQ7L5Y9 396 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 TMEM192Q8IY95 271 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 MYOCDQ8IZQ8 938 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 CCDC155Q8N6L0 562 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 CNNM3Q8NE01 707 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 ARMC2Q8NEN0 867 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 ENGASEQ8NFI3 743 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 ZBTB10Q96DT7 871 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 RUSC1Q9BVN2 902 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 NIFKQ9BYG3 293 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 IRF2BPLQ9H1B7 796 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 CUEDC2Q9H467 287 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 CYP26B1Q9NR63 512 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 HDAC6Q9UBN7 1215 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 USP25Q9UHP3 1055 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 DBR1Q9UK59 544 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 ZFHX4Q86UP3 3567 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 COL1A2P08123 1366 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 GVINP1Q7Z2Y8 2422 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 ATG2AQ2TAZ0 1938 aa9.33□□□□□ -0.92
NEDD4L-218ENST00000587547 NPHP3-ACAD11A0A0J9YXS1 232 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 C17orf102A2RUQ5 167 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 ZBTB42B2RXF5 422 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 LOC730098B7Z3J9 87 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 ATP9BO43861 1147 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 EFCAB14O75071 495 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 CSPG5O95196 566 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 SLFN14P0C7P3 912 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 CASP1P29466 404 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 NBL1P41271 181 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 SLC12A3P55017 1021 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 ZNF200P98182 395 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 RBL2Q08999 1139 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 SIGLEC14Q08ET2 396 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 EMC2Q15006 297 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 CAMK4Q16566 473 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 RINT1Q6NUQ1 792 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 DYMQ7RTS9 669 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 METTL13Q8N6R0 699 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 SYT2Q8N9I0 419 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 LMBR1Q8WVP7 490 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 WNT8BQ93098 351 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 PAGE5Q96GU1 130 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 BLZF1Q9H2G9 400 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 ATP6V0A4Q9HBG4 840 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 POLD4Q9HCU8 107 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 CD207Q9UJ71 328 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 EPG5Q9HCE0 2579 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 CITO14578 2027 aa9.32□□□□□ -0.92
NEDD4L-218ENST00000587547 NCOR2Q9Y618 2525 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 MYMKA6NI61 221 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 RRN3P2A6NIE6 340 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 NCK2O43639 380 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 C22orf31O95567 290 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 CYP11B2P19099 503 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 KLRC1P26715 233 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 ASIC1P78348 528 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 AMPD3Q01432 767 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 PTK2Q05397 1052 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 PNOCQ13519 176 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 TARBP2Q15633 366 aaKnown RBP9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 FAM102BQ5T8I3 360 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 MTHFD1LQ6UB35 978 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 ADSSL1Q8N142 457 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 LRRC71Q8N4P6 559 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 SLC7A3Q8WY07 619 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 ERCC4Q92889 916 aaPredicted RBP9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 CCDC34Q96HJ3 373 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 MSLNLQ96KJ4 702 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 TIGD1Q96MW7 591 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 SAMD11Q96NU1 681 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 FAM49AQ9H0Q0 323 aaPredicted RBP9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 NUP62CLQ9H1M0 184 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 TNMDQ9H2S6 317 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 CLSTN2Q9H4D0 955 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 ZHX3Q9H4I2 956 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 IGFLR1Q9H665 355 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 MAGEF1Q9HAY2 307 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 GTF2IRD1Q9UHL9 959 aa9.31□□□□□ -0.92
NEDD4L-218ENST00000587547 TUBE1Q9UJT0 475 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms