RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 MFSD3Q96ES6 412 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 SERHL2Q9H4I8 314 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 ZNHIT2Q9UHR6 403 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 MRPL42Q9Y6G3 142 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 COL4A3Q01955 1670 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 RNASET2O00584 256 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 ZNF185O15231 689 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 RAB11FIP3O75154 756 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 ITGA10O75578 1167 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 NDUFA10O95299 355 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 ZSCAN20P17040 1043 aaPredicted RBP5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 CANXP27824 592 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 ZEB1P37275 1124 aaPredicted RBP5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 JAZF1Q86VZ6 243 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 AHI1Q8N157 1196 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 OR14C36Q8NHC7 312 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 MDM1Q8TC05 714 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 SLC5A5Q92911 643 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 DCLRE1CQ96SD1 692 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 CDC5LQ99459 802 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 FEZ1Q99689 392 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 WDR11Q9BZH6 1224 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 KCTD10Q9H3F6 313 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 CYP4F11Q9HBI6 524 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 EDARQ9UNE0 448 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 CDY2AQ9Y6F7 541 aa5.84□□□□□ -1.47
SMCHD1-208ENST00000583344 TMEM200CA6NKL6 621 aa5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 BEAN1Q3B7T3 259 aa5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 PDCD4Q53EL6 469 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 CT83Q5H943 113 aa5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 LEO1Q8WVC0 666 aaPredicted RBP5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 CEP95Q96GE4 821 aa5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 WNT8AQ9H1J5 351 aa5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 TOR3AQ9H497 397 aa5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 RIOX1Q9H6W3 641 aa5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 PLAAQ9Y263 795 aa5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 PCSK5Q92824 1860 aa5.83□□□□□ -1.48
SMCHD1-208ENST00000583344 UNC119BA6NIH7 251 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 GSG1L2A8MUP6 293 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 CTSSP25774 331 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 LGALS4P56470 323 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 PDCD1Q15116 288 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 OLFML1Q6UWY5 402 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 ARHGEF19Q8IW93 802 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 SNX33Q8WV41 574 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 SYNPO2LQ9H987 977 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 GPRC5DQ9NZD1 345 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 CLCA2Q9UQC9 943 aa5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 NOC2LQ9Y3T9 749 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-208ENST00000583344 B5MCH6 92 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 ADCY6O43306 1168 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 MEF2AQ02078 507 aaPredicted RBP5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 ATP13A4Q4VNC1 1196 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 C19orf54Q5BKX5 351 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 MFSD14BQ5SR56 506 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 PRAMEF14Q5SWL7 426 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 EFCAB12Q6NXP0 572 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 DRICH1Q6PGQ1 229 aaPredicted RBP5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 PLXDC1Q8IUK5 500 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 CMTR2Q8IYT2 770 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 CPEB3Q8NE35 698 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 RSAD2Q8WXG1 361 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 TFAP2CQ92754 450 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 NEU1Q99519 415 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 POGKQ9P215 609 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 DKK2Q9UBU2 259 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 KCNG1Q9UIX4 513 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 MAP3K2Q9Y2U5 619 aa5.81□□□□□ -1.48
SMCHD1-208ENST00000583344 DCAF1Q9Y4B6 1507 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 A0A087X0B3 334 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 GAGE12BA1L429 117 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 GAGE12HA6NDE8 117 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 ZAR1LA6NP61 321 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 TBKBP1A7MCY6 615 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 KIAA0355O15063 1070 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 USP14P54578 494 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 RASSF3Q86WH2 238 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 PRIMA1Q86XR5 153 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 LCORLQ8N3X6 602 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 SUPT20HQ8NEM7 779 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 VOPP1Q96AW1 172 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 EAF2Q96CJ1 260 aaPredicted RBP5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 ADAM2Q99965 735 aa5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 TOPORSQ9NS56 1045 aaPredicted RBP5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 USP15Q9Y4E8 981 aaPredicted RBP5.8□□□□□ -1.48
SMCHD1-208ENST00000583344 PDE8AO60658 829 aa5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 CLK3P49761 638 aaKnown RBP5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 TP53BP2Q13625 1128 aa5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 BMT2Q1RMZ1 405 aa5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 FAM102AQ5T9C2 384 aaPredicted RBP5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 KIAA0907Q7Z7F0 614 aaPredicted RBP5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 REPS2Q8NFH8 660 aa5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 SLC35B2Q8TB61 432 aa5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 NTN5Q8WTR8 489 aaPredicted RBP5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 ZNF480Q8WV37 535 aa5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 BBC3Q96PG8 261 aaPredicted RBP5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 SYBUQ9NX95 663 aa5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 PTGFRNQ9P2B2 879 aa5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 TNFRSF18Q9Y5U5 241 aa5.79□□□□□ -1.48
SMCHD1-208ENST00000583344 DIRC3C9JPN6 131 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms