RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 LCA5LO95447 670 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 CPP00450 1065 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 VEGFAP15692 232 aaPredicted RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 CUL1Q13616 776 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TRIP4Q15650 581 aaPredicted RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 TTI2Q6NXR4 508 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 USP17L1Q7RTZ2 530 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 KRT25Q7Z3Z0 450 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TRIM59Q8IWR1 403 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 RILPQ96NA2 401 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 EFHD1Q9BUP0 239 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 PCDHB13Q9Y5F0 798 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 H0Y626 953 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 DYNC1LI2O43237 492 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 CREB3O43889 395 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 OPHN1O60890 802 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ATF4P18848 351 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 TROAPQ12815 778 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 BFSP1Q12934 665 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 FSCBQ5H9T9 825 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 SZRD1Q7Z422 152 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 METTL23Q86XA0 190 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 CNPY4Q8N129 248 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 UHMK1Q8TAS1 419 aaKnown RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 ZBED2Q9BTP6 218 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ZNF408Q9H9D4 720 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 MPP6Q9NZW5 540 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 BAIAP2L1Q9UHR4 511 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ADAMTSL1Q8N6G6 1762 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 TRIM64A6NGJ6 449 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 SPDYE3A6NKU9 549 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 H7C0S8 307 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 TAF4O00268 1085 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 RPN2P04844 631 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 PDHBP11177 359 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 CYP19A1P11511 503 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 KCNB1Q14721 858 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 TRADDQ15628 312 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 MEA1Q16626 185 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 CEP55Q53EZ4 464 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 CEP78Q5JTW2 689 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ADAT2Q7Z6V5 191 aaKnown RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 RASSF5Q8WWW0 418 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 DUSP9Q99956 384 aaKnown RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 BRIP1Q9BX63 1249 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 FHDC1Q9C0D6 1143 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 GOLPH3Q9H4A6 298 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 SLC40A1Q9NP59 571 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 VAV3Q9UKW4 847 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 WDR81Q562E7 1941 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ROBO3Q96MS0 1386 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 PIK3CDO00329 1044 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 KRIT1O00522 736 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 RAD51CO43502 376 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 GPC4O75487 556 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 USP17L8P0C7I0 530 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 FOSL2P15408 326 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 TMOD1P28289 359 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 PPP1R2P41236 205 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 MRPS35P82673 323 aaKnown RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 DNAJC3Q13217 504 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 PPP2R5AQ15172 486 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 DCAF17Q5H9S7 520 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 FAM47CQ5HY64 1035 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ANGPTL8Q6UXH0 198 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 RRM2BQ7LG56 351 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 MYLK4Q86YV6 388 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 PARP9Q8IXQ6 854 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 B4GALNT2Q8NHY0 566 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 CAPSLQ8WWF8 208 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 LARP4BQ92615 738 aaKnown RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 CYFIP2Q96F07 1278 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ACSBG1Q96GR2 724 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 FAM81BQ96LP2 452 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 TRIM9Q9C026 710 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 DNAJC17Q9NVM6 304 aaKnown RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 ARPP21Q9UBL0 812 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 TMCC3Q9ULS5 477 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 POTEMA6NI47 508 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ZNF233A6NK53 670 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 HGSO14964 777 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 CHEK2O96017 543 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 RPSAP08865 295 aaKnown RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 TROVE2P10155 538 aaKnown RBP eCLIP4.52□□□□□ -1.69
RTTN-206ENST00000581161 RALBP11234 206 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 IL6STP40189 918 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 RECQLP46063 649 aaPredicted RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 GNAQP50148 359 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 PMS2P54278 862 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 DHX9Q08211 1270 aaKnown RBP4.52□□□□□ -1.69
RTTN-206ENST00000581161 MIIPQ5JXC2 388 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ZNF544Q6NX49 715 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ARMC6Q6NXE6 501 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 KCNV1Q6PIU1 500 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 ANO5Q75V66 913 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 NEK8Q86SG6 692 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 FAM178BQ8IXR5 827 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 CCDC24Q8N4L8 307 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 MTMR8Q96EF0 704 aa4.52□□□□□ -1.69
RTTN-206ENST00000581161 DDX47Q9H0S4 455 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms