RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SUCLA2Q9P2R7 463 aaPredicted RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 STOML1Q9UBI4 398 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 PI4K2BG5E9Z4 385 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 KRT38O76015 456 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 COMTP21964 271 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 SSTR3P32745 418 aaPredicted RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 COPB2P35606 906 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 CDK17Q00537 523 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 STAT4Q14765 748 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 EXOC8Q8IYI6 725 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 NLRP7Q8WX94 980 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 IP6K2Q9UHH9 426 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 HERC5Q9UII4 1024 aaKnown RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 NUB1Q9Y5A7 615 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 UBE4BO95155 1302 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 BMP6P22004 513 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 SPP2Q13103 211 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 SLC27A3Q5K4L6 730 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 CIAPIN1Q6FI81 312 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 SNRNP48Q6IEG0 339 aaKnown RBP11.59□□□□□ -0.55
RNF43-203ENST00000577716 TRIM72Q6ZMU5 477 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 CYFIP1Q7L576 1253 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 GPD1LQ8N335 351 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 CEP120Q8N960 986 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 LINC00116Q8NCU8 138 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 MCUQ8NE86 351 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 TPCN2Q8NHX9 752 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 DEPDC1BQ8WUY9 529 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 GRAMD1AQ96CP6 724 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 FAM167BQ9BTA0 163 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 MKNK1Q9BUB5 465 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 CARD9Q9H257 536 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 SNX25Q9H3E2 840 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 LRRC4Q9HBW1 653 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 ZNF446Q9NWS9 450 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 RBAKQ9NYW8 714 aaPredicted RBP11.59□□□□□ -0.55
RNF43-203ENST00000577716 ANGPTL2Q9UKU9 493 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 PRR12Q9ULL5 1215 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 STRIP2Q9ULQ0 834 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 ARL2BPQ9Y2Y0 163 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 PCDHA10Q9Y5I2 948 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 ARSEP51690 589 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 SLC29A2Q14542 456 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 FAM47CQ5HY64 1035 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 ATP11CQ8NB49 1132 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 PACSIN1Q9BY11 444 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 SLC9A2Q9UBY0 812 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 CHORDC1Q9UHD1 332 aaPredicted RBP11.59□□□□□ -0.55
RNF43-203ENST00000577716 AGO2Q9UKV8 859 aaKnown RBP11.59□□□□□ -0.55
RNF43-203ENST00000577716 RIMS1Q86UR5 1692 aaKnown RBP11.59□□□□□ -0.55
RNF43-203ENST00000577716 MST1RQ04912 1400 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 MYBL1P10243 752 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 TRMT10CQ7L0Y3 403 aaKnown RBP11.59□□□□□ -0.55
RNF43-203ENST00000577716 ZC3H18Q86VM9 953 aaKnown RBP11.59□□□□□ -0.55
RNF43-203ENST00000577716 TRAIPQ9BWF2 469 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 VCX3AQ9NNX9 186 aa11.59□□□□□ -0.55
RNF43-203ENST00000577716 KRT7P08729 469 aa11.58□□□□□ -0.55
RNF43-203ENST00000577716 YWHABP31946 246 aaKnown RBP11.58□□□□□ -0.55
RNF43-203ENST00000577716 BAG6P46379 1132 aa11.58□□□□□ -0.55
RNF43-203ENST00000577716 ARFIP2P53365 341 aa11.58□□□□□ -0.55
RNF43-203ENST00000577716 PSMC1P62191 440 aaKnown RBP11.58□□□□□ -0.55
RNF43-203ENST00000577716 KYNUQ16719 465 aa11.58□□□□□ -0.55
RNF43-203ENST00000577716 TTLL6Q8N841 843 aa11.58□□□□□ -0.55
RNF43-203ENST00000577716 PPWD1Q96BP3 646 aaKnown RBP11.58□□□□□ -0.55
RNF43-203ENST00000577716 RBM15Q96T37 977 aaKnown RBP eCLIP11.58□□□□□ -0.551e-7■■■□□ 15.6
RNF43-203ENST00000577716 FGFR1OP2Q9NVK5 253 aa11.58□□□□□ -0.55
RNF43-203ENST00000577716 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.55
RNF43-203ENST00000577716 CFAP69A5D8W1 941 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 ATMINO43313 823 aaPredicted RBP11.58□□□□□ -0.56
RNF43-203ENST00000577716 CDR2Q01850 454 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 MKRN3Q13064 507 aaKnown RBP11.58□□□□□ -0.56
RNF43-203ENST00000577716 PRPSAP1Q14558 356 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 STXBP2Q15833 593 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 GRAMD1BQ3KR37 738 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 SUPT20HL1Q3ZLR7 823 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 ARHGAP27Q6ZUM4 889 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 TXNRD3Q86VQ6 643 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 MYCBPAPQ8TBZ2 947 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 MDM1Q8TC05 714 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 MTMR8Q96EF0 704 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 EIF4E1BA6NMX2 242 aaKnown RBP11.58□□□□□ -0.56
RNF43-203ENST00000577716 CFLARO15519 480 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 ITIH2P19823 946 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 RC3H1Q5TC82 1133 aaKnown RBP11.58□□□□□ -0.56
RNF43-203ENST00000577716 DDX27Q96GQ7 796 aaKnown RBP11.58□□□□□ -0.56
RNF43-203ENST00000577716 POLR3FQ9H1D9 316 aaPredicted RBP11.58□□□□□ -0.56
RNF43-203ENST00000577716 CCDC68Q9H2F9 335 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 TRABDQ9H4I3 376 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 KCND1Q9NSA2 647 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 INTS13Q9NVM9 706 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 KLHL11Q9NVR0 708 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 FAM237AA0A1B0GTK4 181 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 SPECC1L-ADORA2AF8WAN1 911 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 LMNAP02545 664 aaKnown RBP11.58□□□□□ -0.56
RNF43-203ENST00000577716 PDHA1P08559 390 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 ZNF568Q3ZCX4 644 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 HSP90AA5PQ58FG0 334 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 SPOPLQ6IQ16 392 aa11.58□□□□□ -0.56
RNF43-203ENST00000577716 INTS5Q6P9B9 1019 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms