RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 LRRC8DQ7L1W4 858 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 USP37Q86T82 979 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 FAM228AQ86W67 206 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 CDR2LQ86X02 465 aaPredicted RBP17.98■□□□□ 0.47
ERCC4-208ENST00000576348 CCDC51Q96ER9 411 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 TRIM6Q9C030 488 aaPredicted RBP17.98■□□□□ 0.47
ERCC4-208ENST00000576348 HIPK3Q9H422 1215 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 PDZD7Q9H5P4 517 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 AGPAT5Q9NUQ2 364 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 TMEM39AQ9NV64 488 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 IFNKQ9P0W0 207 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 LIMA1Q9UHB6 759 aaKnown RBP17.98■□□□□ 0.47
ERCC4-208ENST00000576348 KAT6AQ92794 2004 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 ZNF233A6NK53 670 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 TTLL13PA6NNM8 815 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 OGTO15294 1046 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 CASP4P49662 377 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 COPB1P53618 953 aaKnown RBP17.97■□□□□ 0.47
ERCC4-208ENST00000576348 UBASH3AP57075 661 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 RBL2Q08999 1139 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 SNRNP35Q16560 246 aaKnown RBP17.97■□□□□ 0.47
ERCC4-208ENST00000576348 DCAF17Q5H9S7 520 aaPredicted RBP17.97■□□□□ 0.47
ERCC4-208ENST00000576348 FBXO47Q5MNV8 452 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 EEF1DP3Q658K8 133 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 SLC27A1Q6PCB7 646 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 IRF2BP1Q8IU81 584 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 TUBGCP2Q9BSJ2 902 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 NOC4LQ9BVI4 516 aaKnown RBP17.97■□□□□ 0.47
ERCC4-208ENST00000576348 HSD3B7Q9H2F3 369 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 ST3GAL5Q9UNP4 418 aa17.97■□□□□ 0.47
ERCC4-208ENST00000576348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.97■□□□□ 0.47
ERCC4-208ENST00000576348 A0A1B0GUA9 196 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 PITPNM1O00562 1244 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 MAPK13O15264 365 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 NPTXRO95502 500 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 CLTBP09497 229 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 ZSCAN20P17040 1043 aaPredicted RBP17.96■□□□□ 0.47
ERCC4-208ENST00000576348 PROZP22891 400 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 CD52P31358 61 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 ACOT2P49753 483 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 PPP2R3AQ06190 1150 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 LPIN1Q14693 890 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 MAN2A1Q16706 1144 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 LRRC26Q2I0M4 334 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 FKBP15Q5T1M5 1219 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 TWF2Q6IBS0 349 aaKnown RBP17.96■□□□□ 0.47
ERCC4-208ENST00000576348 SARM1Q6SZW1 724 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 INTS8Q75QN2 995 aaKnown RBP17.96■□□□□ 0.47
ERCC4-208ENST00000576348 THNSL1Q8IYQ7 743 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 TMEM174Q8WUU8 243 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 CDT1Q9H211 546 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 VPS16Q9H269 839 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 PRDM5Q9NQX1 630 aaPredicted RBP17.96■□□□□ 0.47
ERCC4-208ENST00000576348 SQORQ9Y6N5 450 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 MYH11P35749 1972 aa17.96■□□□□ 0.47
ERCC4-208ENST00000576348 FAAP100Q0VG06 881 aa17.95■□□□□ 0.46
ERCC4-208ENST00000576348 CBWD2Q8IUF1 395 aa17.95■□□□□ 0.46
ERCC4-208ENST00000576348 HACE1Q8IYU2 909 aa17.95■□□□□ 0.46
ERCC4-208ENST00000576348 CCDC94Q9BW85 323 aaPredicted RBP17.95■□□□□ 0.46
ERCC4-208ENST00000576348 PPP1R12CQ9BZL4 782 aa17.95■□□□□ 0.46
ERCC4-208ENST00000576348 PTPRHQ9HD43 1115 aa17.95■□□□□ 0.46
ERCC4-208ENST00000576348 ERVK-5Q9HDB9 667 aa17.95■□□□□ 0.46
ERCC4-208ENST00000576348 CHST12Q9NRB3 414 aa17.95■□□□□ 0.46
ERCC4-208ENST00000576348 RBAKQ9NYW8 714 aaPredicted RBP17.95■□□□□ 0.46
ERCC4-208ENST00000576348 PADI3Q9ULW8 664 aa17.95■□□□□ 0.46
ERCC4-208ENST00000576348 STX10O60499 249 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 PARNO95453 639 aaKnown RBP17.94■□□□□ 0.46
ERCC4-208ENST00000576348 CLTAP09496 248 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 VAMP7P51809 220 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 ZNF75DP51815 510 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 MARSP56192 900 aaKnown RBP17.94■□□□□ 0.46
ERCC4-208ENST00000576348 OSTNP61366 133 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 CYP24A1Q07973 514 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 VWA3BQ502W6 1294 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 TRIM59Q8IWR1 403 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 FAM212AQ96EL1 285 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 FNBP1Q96RU3 617 aa17.94■□□□□ 0.46
ERCC4-208ENST00000576348 XPO4Q9C0E2 1151 aaKnown RBP17.94■□□□□ 0.46
ERCC4-208ENST00000576348 AGO3Q9H9G7 860 aaKnown RBP17.94■□□□□ 0.46
ERCC4-208ENST00000576348 RPF1Q9H9Y2 349 aaKnown RBP17.94■□□□□ 0.46
ERCC4-208ENST00000576348 ADCY5O95622 1261 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 ADRB2P07550 413 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 HOXA11P31270 313 aaPredicted RBP17.93■□□□□ 0.46
ERCC4-208ENST00000576348 YARSP54577 528 aaKnown RBP17.93■□□□□ 0.46
ERCC4-208ENST00000576348 CCL23P55773 120 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 BFSP1Q12934 665 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 SURF1Q15526 300 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 SEZ6Q53EL9 994 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 DRC7Q8IY82 874 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 ZSWIM2Q8NEG5 633 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 CCDC127Q96BQ5 260 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 FBXL18Q96ME1 805 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 IFIH1Q9BYX4 1025 aaKnown RBP17.93■□□□□ 0.46
ERCC4-208ENST00000576348 HAPLN2Q9GZV7 340 aa17.93■□□□□ 0.46
ERCC4-208ENST00000576348 LGALS16A8MUM7 142 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 ABLIM1O14639 778 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 AFPP02771 609 aaKnown RBP17.92■□□□□ 0.46
ERCC4-208ENST00000576348 STAG3L1P0CL83 205 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 IBSPP21815 317 aaPredicted RBP17.92■□□□□ 0.46
ERCC4-208ENST00000576348 CYP2C18P33260 490 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms