RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 HAUS6Q7Z4H7 955 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 CDR2LQ86X02 465 aaPredicted RBP14.91□□□□□ -0.02
CIITA-210ENST00000575513 IQUBQ8NA54 791 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 GSTCDQ8NEC7 633 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 DDX12PQ92771 950 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 HLA-CQ95604 372 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 GAD1Q99259 594 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 PYM1Q9BRP8 204 aaKnown RBP14.91□□□□□ -0.02
CIITA-210ENST00000575513 NGRNQ9NPE2 291 aaKnown RBP14.91□□□□□ -0.02
CIITA-210ENST00000575513 TLR9Q9NR96 1032 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 TSHZ2Q9NRE2 1034 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 THEGQ9P2T0 379 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 SEL1LQ9UBV2 794 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 CIZ1Q9ULV3 898 aaPredicted RBP14.91□□□□□ -0.02
CIITA-210ENST00000575513 NLRC5Q86WI3 1866 aa14.91□□□□□ -0.02
CIITA-210ENST00000575513 SPTBN5Q9NRC6 3674 aaKnown RBP14.9□□□□□ -0.02
CIITA-210ENST00000575513 A0A0C4DFX4 3053 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 A0A087X0B3 334 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 FSD2A1L4K1 749 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 FSCN2O14926 492 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 ZC3H11AO75152 810 aaKnown RBP eCLIP14.9□□□□□ -0.02
CIITA-210ENST00000575513 NR1I2O75469 434 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 TOM1L1O75674 476 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 DDHD2O94830 711 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 POMCP01189 267 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 MCF2P10911 925 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 GAP43P17677 238 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 AKAP5P24588 427 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 MLH1P40692 756 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 AFF1P51825 1210 aaKnown RBP14.9□□□□□ -0.02
CIITA-210ENST00000575513 GTF2BQ00403 316 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 AMPD3Q01432 767 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 CACNB1Q02641 598 aaPredicted RBP14.9□□□□□ -0.02
CIITA-210ENST00000575513 BMS1Q14692 1282 aaKnown RBP14.9□□□□□ -0.02
CIITA-210ENST00000575513 SKIV2LQ15477 1246 aaKnown RBP14.9□□□□□ -0.02
CIITA-210ENST00000575513 E2F4Q16254 413 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 TCEAL5Q5H9L2 206 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 RESP18Q5W5W9 173 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 EEF1DP3Q658K8 133 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 DDX53Q86TM3 631 aaKnown RBP14.9□□□□□ -0.02
CIITA-210ENST00000575513 ZNF280BQ86YH2 543 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 FAM178BQ8IXR5 827 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 COLGALT2Q8IYK4 626 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 DNAJC19Q96DA6 116 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 TMEM169Q96HH4 297 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 IGSF21Q96ID5 467 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 FIZ1Q96SL8 496 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 TARS2Q9BW92 718 aaKnown RBP14.9□□□□□ -0.02
CIITA-210ENST00000575513 PANK2Q9BZ23 570 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 SCAND2PQ9GZW5 306 aaPredicted RBP14.9□□□□□ -0.02
CIITA-210ENST00000575513 TNMDQ9H2S6 317 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 MAGEF1Q9HAY2 307 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 KBTBD4Q9NVX7 518 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 FAM13BQ9NYF5 915 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 PARP2Q9UGN5 583 aa14.9□□□□□ -0.02
CIITA-210ENST00000575513 MYMKA6NI61 221 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 ABLIM1O14639 778 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 PIGRP01833 764 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 GRM5P41594 1212 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 MRPS5P82675 430 aaKnown RBP14.89□□□□□ -0.03
CIITA-210ENST00000575513 GRIK3Q13003 919 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 ADALQ6DHV7 355 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 CNNM4Q6P4Q7 775 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 MPZL3Q6UWV2 235 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 PDILTQ8N807 584 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 PABPC5Q96DU9 382 aaKnown RBP14.89□□□□□ -0.03
CIITA-210ENST00000575513 ZFP42Q96MM3 310 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 TCHPQ9BT92 498 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 APOL6Q9BWW8 343 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 MIOSQ9NXC5 875 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 SNTG2Q9NY99 539 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 DNAJB4Q9UDY4 337 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 TBX20Q9UMR3 447 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 USP20Q9Y2K6 914 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 FAN1Q9Y2M0 1017 aa14.89□□□□□ -0.03
CIITA-210ENST00000575513 COL4A4P53420 1690 aaPredicted RBP14.89□□□□□ -0.03
CIITA-210ENST00000575513 UNC80Q8N2C7 3258 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 FRMD3A2A2Y4 597 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 CLDN3O15551 220 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 RECQL4O94761 1208 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 CMA1P23946 247 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 PBX3P40426 434 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 SLC11A1P49279 550 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 SCNN1GP51170 649 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 ERVFC1P60507 584 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 MCL1Q07820 350 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 KYAT1Q16773 422 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 CTC1Q2NKJ3 1217 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 ZNF568Q3ZCX4 644 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 ALKAL1Q6UXT8 129 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 DYMQ7RTS9 669 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 ZNF720Q7Z2F6 126 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 MICAL1Q8TDZ2 1067 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 LEO1Q8WVC0 666 aaPredicted RBP14.88□□□□□ -0.03
CIITA-210ENST00000575513 HVCN1Q96D96 273 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 SPATA32Q96LK8 384 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 ASB2Q96Q27 587 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 RPS6KC1Q96S38 1066 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 CDCA3Q99618 268 aaPredicted RBP14.88□□□□□ -0.03
CIITA-210ENST00000575513 CCDC94Q9BW85 323 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms