RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 CAMK1Q14012 370 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 EPC2Q52LR7 807 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 ZBTB41Q5SVQ8 909 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 SLC27A1Q6PCB7 646 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 ZNF720Q7Z2F6 126 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 ZBTB33Q86T24 672 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 TMEM173Q86WV6 379 aaPredicted RBP7.68□□□□□ -1.18
SMG6-209ENST00000571442 ZNF280BQ86YH2 543 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 FMR1NBQ8N0W7 255 aaPredicted RBP7.68□□□□□ -1.18
SMG6-209ENST00000571442 FIBCD1Q8N539 461 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 IQUBQ8NA54 791 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 ZSWIM2Q8NEG5 633 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 ENGASEQ8NFI3 743 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 BCL7CQ8WUZ0 217 aaPredicted RBP7.68□□□□□ -1.18
SMG6-209ENST00000571442 MRPS27Q92552 414 aaKnown RBP7.68□□□□□ -1.18
SMG6-209ENST00000571442 KCNN1Q92952 543 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 ZFP42Q96MM3 310 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 IPO9Q96P70 1041 aaKnown RBP7.68□□□□□ -1.18
SMG6-209ENST00000571442 TGS1Q96RS0 853 aaKnown RBP7.68□□□□□ -1.18
SMG6-209ENST00000571442 GAD1Q99259 594 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 C7orf25Q9BPX7 421 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 COL25A1Q9BXS0 654 aaPredicted RBP7.68□□□□□ -1.18
SMG6-209ENST00000571442 TMEM117Q9H0C3 514 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 NRDE2Q9H7Z3 1164 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 PANK4Q9NVE7 773 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 TBC1D13Q9NVG8 400 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 SNTG2Q9NY99 539 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 DNAJB4Q9UDY4 337 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 TBX20Q9UMR3 447 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 TNFSF13BQ9Y275 285 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 INPP5FQ9Y2H2 1132 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 REV3LO60673 3130 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 CITO14578 2027 aa7.68□□□□□ -1.18
SMG6-209ENST00000571442 NT5C1B-RDH14C9J2C7 533 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 PTGESO14684 152 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 N4BP3O15049 544 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 GRM6O15303 877 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 FAM189A1O60320 539 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 RECQL4O94761 1208 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 PRPF6O94906 941 aaKnown RBP7.67□□□□□ -1.18
SMG6-209ENST00000571442 ZNF202O95125 648 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 CSPG5O95196 566 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 POMCP01189 267 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 ITGB1P05556 798 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 SLFN14P0C7P3 912 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 HARSP12081 509 aaKnown RBP7.67□□□□□ -1.18
SMG6-209ENST00000571442 ITGA4P13612 1032 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 CTNNB1P35222 781 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 BMPR1AP36894 532 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 MLH1P40692 756 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 TNFSF9P41273 254 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 RAB27AP51159 221 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 SCNN1GP51170 649 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 WNT7BP56706 349 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 OSTNP61366 133 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 ASIC1P78348 528 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 PCBP1Q15365 356 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMG6-209ENST00000571442 NAB2Q15742 525 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 HERC4Q5GLZ8 1057 aaPredicted RBP7.67□□□□□ -1.18
SMG6-209ENST00000571442 CNNM4Q6P4Q7 775 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 KRBA2Q6ZNG9 492 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 MAP4K3Q8IVH8 894 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 FAM178BQ8IXR5 827 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 KLHL23Q8NBE8 558 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 COLGALT1Q8NBJ5 622 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 ERCC4Q92889 916 aaPredicted RBP7.67□□□□□ -1.18
SMG6-209ENST00000571442 CCDC51Q96ER9 411 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 MRPL4Q9BYD3 311 aaKnown RBP7.67□□□□□ -1.18
SMG6-209ENST00000571442 CUEDC2Q9H467 287 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 ST6GALNAC4Q9H4F1 302 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 RSAD1Q9HA92 442 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 LARSQ9P2J5 1176 aaKnown RBP7.67□□□□□ -1.18
SMG6-209ENST00000571442 GDAQ9Y2T3 454 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 PCDHGC5Q9Y5F6 944 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 ZMYM2Q9UBW7 1377 aa7.67□□□□□ -1.18
SMG6-209ENST00000571442 ARL5CA6NH57 179 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 C5orf67F2Z3F1 127 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 H3BNC9 293 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 INPPL1O15357 1258 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 NR1I2O75469 434 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 GCNT3O95395 438 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 PIGRP01833 764 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 ADSSP30520 456 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 IRS1P35568 1242 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 SLC11A1P49279 550 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 SMTNP53814 917 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 DPYDQ12882 1025 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 TMEM132AQ24JP5 1023 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 ZNF568Q3ZCX4 644 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 KMT5BQ4FZB7 885 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 NOMO2Q5JPE7 1267 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 GLRA4Q5JXX5 417 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 SCARA3Q6AZY7 606 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 MPZL3Q6UWV2 235 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 FAM43BQ6ZT52 329 aaPredicted RBP7.66□□□□□ -1.18
SMG6-209ENST00000571442 UNC13DQ70J99 1090 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 EPM2AIP1Q7L775 607 aaPredicted RBP7.66□□□□□ -1.18
SMG6-209ENST00000571442 THNSL1Q8IYQ7 743 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 LRRC43Q8N309 656 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 TMEM87AQ8NBN3 555 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms