RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 NPTXRO95502 500 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 YEATS4O95619 227 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 GLP2RO95838 553 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 C1RP00736 705 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 PIGRP01833 764 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 ZSCAN22P10073 491 aaPredicted RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 CTSAP10619 480 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 MAPTP10636 758 aaKnown RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 MARCKSP29966 332 aaPredicted RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 GTF2F1P35269 517 aaKnown RBP eCLIP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 KCNQ1P51787 676 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 DLX2Q07687 328 aaPredicted RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 COASYQ13057 564 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 KARSQ15046 597 aaKnown RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 DCAF4L1Q3SXM0 396 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 AXDND1Q5T1B0 1012 aaPredicted RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 EEF1DP3Q658K8 133 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 HACE1Q8IYU2 909 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 KRI1Q8N9T8 703 aaKnown RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 RNF169Q8NCN4 708 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 BCL7CQ8WUZ0 217 aaPredicted RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 LARP4BQ92615 738 aaKnown RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 PPP2R3CQ969Q6 453 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 ZFP42Q96MM3 310 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 CLIC6Q96NY7 704 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 KIFC3Q9BVG8 833 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 STRA6Q9BX79 667 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 VN1R3Q9BXE9 311 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 ZBP1Q9H171 429 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 NXF3Q9H4D5 531 aaKnown RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 KMT5AQ9NQR1 393 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 CLEC1BQ9P126 229 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 LARSQ9P2J5 1176 aaKnown RBP9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 C2orf16Q68DN1 1984 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 DOCK6Q96HP0 2047 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 FRMD3A2A2Y4 597 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 SFI1A8K8P3 1242 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 NT5C1B-RDH14C9J2C7 533 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 H0YCG3 227 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 PTGESO14684 152 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 ZC3H11AO75152 810 aaKnown RBP eCLIP9□□□□□ -0.97
HDGFL3-205ENST00000568129 TBX10O75333 385 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 F13A1P00488 732 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 ADRB2P07550 413 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 AKAP5P24588 427 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 ABCD1P33897 745 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 PBX3P40426 434 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 MLH1P40692 756 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 GRM5P41594 1212 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 SMTNP53814 917 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 GTF2BQ00403 316 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 GRIK3Q13003 919 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 MCM6Q14566 821 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 SKIV2LQ15477 1246 aaKnown RBP9□□□□□ -0.97
HDGFL3-205ENST00000568129 LONRF3Q496Y0 759 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 ATF7IP2Q5U623 682 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 CNNM4Q6P4Q7 775 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 ZPBP2Q6X784 338 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 CDR2LQ86X02 465 aaPredicted RBP9□□□□□ -0.97
HDGFL3-205ENST00000568129 VN1R2Q8NFZ6 395 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 DNAJC19Q96DA6 116 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 TMEM169Q96HH4 297 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 CDK5RAP3Q96JB5 506 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 ZNF396Q96N95 335 aaPredicted RBP9□□□□□ -0.97
HDGFL3-205ENST00000568129 PLIN2Q99541 437 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 TCF25Q9BQ70 676 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 REEP2Q9BRK0 252 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 ADPGKQ9BRR6 497 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 MRPL4Q9BYD3 311 aaKnown RBP9□□□□□ -0.97
HDGFL3-205ENST00000568129 TRIM6Q9C030 488 aaPredicted RBP9□□□□□ -0.97
HDGFL3-205ENST00000568129 CHST7Q9NS84 486 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 FOXD4L1Q9NU39 408 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 MARCH5Q9NX47 278 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 CCDC39Q9UFE4 941 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 RCOR1Q9UKL0 485 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 FAN1Q9Y2M0 1017 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 ZDHHC9Q9Y397 364 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 PCDHGC5Q9Y5F6 944 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 DENND4AQ7Z401 1863 aa9□□□□□ -0.97
HDGFL3-205ENST00000568129 A0A087X0B3 334 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 NPHP3-ACAD11A0A0J9YXS1 232 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 C19orf67A6NJJ6 358 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 CCDC169A6NNP5 214 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 HIDE1A8MVS5 230 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 TMEM189-UBE2V1I3L0A0 370 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SPTLC2O15270 562 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SLC16A4O15374 487 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 LINC01565O15544 149 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 FAM189A1O60320 539 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 TOM1L1O75674 476 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 PPP1R37O75864 691 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 RECQL4O94761 1208 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 POMCP01189 267 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SOD2P04179 222 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 MCF2P10911 925 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 IBSPP21815 317 aaPredicted RBP8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 KCNA5P22460 613 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 NRIP1P48552 1158 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SCNN1GP51170 649 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 RNASELQ05823 741 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms