RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TAS1R1Q7RTX1 841 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 CATSPER3Q86XQ3 398 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 GSTCDQ8NEC7 633 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 TMEM60Q9H2L4 133 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 FZD8Q9H461 694 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.62■□□□□ 0.25
RNF40-209ENST00000566703 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
RNF40-209ENST00000566703 LIMCH1Q9UPQ0 1083 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 POTEMA6NI47 508 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 C2CD2LO14523 706 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 TEX28O15482 410 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 USO1O60763 962 aaKnown RBP16.61■□□□□ 0.25
RNF40-209ENST00000566703 RPA1P27694 616 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 MCM7P33993 719 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 GRIK3Q13003 919 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 ERMNQ8TAM6 284 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 ZFP42Q96MM3 310 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 LLPHQ9BRT6 129 aaKnown RBP16.61■□□□□ 0.25
RNF40-209ENST00000566703 C2orf40Q9H1Z8 148 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 FOXP1Q9H334 677 aaPredicted RBP16.61■□□□□ 0.25
RNF40-209ENST00000566703 NXF3Q9H4D5 531 aaKnown RBP16.61■□□□□ 0.25
RNF40-209ENST00000566703 PLEKHA4Q9H4M7 779 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 FNIP2Q9P278 1114 aa16.61■□□□□ 0.25
RNF40-209ENST00000566703 LRRIQ4A6NIV6 560 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 B4GALT5O43286 388 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 GLUD1P00367 558 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 ASGR2P07307 311 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 CYP11B2P19099 503 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 ATP2B1P20020 1258 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 ST3GAL1Q11201 340 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 USP41Q3LFD5 358 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 CDCA2Q69YH5 1023 aaPredicted RBP16.6■□□□□ 0.25
RNF40-209ENST00000566703 ZBTB8OSQ8IWT0 167 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 C8orf76Q96K31 380 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 APOL6Q9BWW8 343 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 MAN1C1Q9NR34 630 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 IGSF9Q9P2J2 1179 aa16.6■□□□□ 0.25
RNF40-209ENST00000566703 A0A087WWV3 80 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 CCDC195A0A1B0GUA6 201 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 MED24O75448 989 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 TADA2AO75478 443 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 NPTXRO95502 500 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 PDGFBP01127 241 aaPredicted RBP16.59■□□□□ 0.25
RNF40-209ENST00000566703 AKAP5P24588 427 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 CLCN5P51795 746 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 CREMQ03060 361 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 TDGQ13569 410 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 FUT10Q6P4F1 479 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 MAEAQ7L5Y9 396 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 STAMQ92783 540 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 WDR6Q9NNW5 1121 aaKnown RBP16.59■□□□□ 0.25
RNF40-209ENST00000566703 GPRC5CQ9NQ84 441 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 PARP2Q9UGN5 583 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 ADAM28Q9UKQ2 775 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 C5orf42Q9H799 3197 aa16.59■□□□□ 0.25
RNF40-209ENST00000566703 N4BP3O15049 544 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 GALR2O43603 387 aaPredicted RBP16.58■□□□□ 0.24
RNF40-209ENST00000566703 OR52Z1P0C646 297 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 NAMPTP43490 491 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 TRAPPC10P48553 1259 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 RBM25P49756 843 aaKnown RBP16.58■□□□□ 0.24
RNF40-209ENST00000566703 FOSBP53539 338 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 HMGN5P82970 282 aaKnown RBP16.58■□□□□ 0.24
RNF40-209ENST00000566703 PPP2R5AQ15172 486 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 MAPK6Q16659 721 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 ASTLQ6HA08 431 aaPredicted RBP16.58■□□□□ 0.24
RNF40-209ENST00000566703 LILRA6Q6PI73 481 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 NXPE3Q969Y0 559 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
RNF40-209ENST00000566703 GPR62Q9BZJ7 368 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 ZDHHC7Q9NXF8 308 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 STK24Q9Y6E0 443 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 PIEZO1Q92508 2521 aa16.58■□□□□ 0.24
RNF40-209ENST00000566703 MYO10Q9HD67 2058 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 ARHGEF35A5YM69 484 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 ACKR2O00590 384 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 GUCY1B3Q02153 619 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 TUSC3Q13454 348 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 ZNF174Q15697 407 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 PADI6Q6TGC4 694 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 CDR2LQ86X02 465 aaPredicted RBP16.57■□□□□ 0.24
RNF40-209ENST00000566703 FBXO18Q8NFZ0 1043 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 FEZF2Q8TBJ5 459 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 PHOX2BQ99453 314 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 KCNK12Q9HB15 430 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 KLK14Q9P0G3 267 aa16.57■□□□□ 0.24
RNF40-209ENST00000566703 ARID2Q68CP9 1835 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 SF3B1O75533 1304 aaKnown RBP eCLIP16.56■□□□□ 0.247e-6■■■■■ 33.4
RNF40-209ENST00000566703 THP07101 528 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 PRPF4BQ13523 1007 aaKnown RBP16.56■□□□□ 0.24
RNF40-209ENST00000566703 PDIA5Q14554 519 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 HSP90AA2PQ14568 343 aaPredicted RBP16.56■□□□□ 0.24
RNF40-209ENST00000566703 HAUS3Q68CZ6 603 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 CCDC83Q8IWF9 413 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 DEPTORQ8TB45 409 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 RIN2Q8WYP3 895 aaPredicted RBP16.56■□□□□ 0.24
RNF40-209ENST00000566703 SMG7Q92540 1137 aaKnown RBP16.56■□□□□ 0.24
RNF40-209ENST00000566703 ATOH1Q92858 354 aaPredicted RBP16.56■□□□□ 0.24
RNF40-209ENST00000566703 ADPGKQ9BRR6 497 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 NT5C3AQ9H0P0 336 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms