RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 AGAP11Q8TF27 550 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 NACC1Q96RE7 527 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 NUP85Q9BW27 656 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 DNAJC17Q9NVM6 304 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 STK38LQ9Y2H1 464 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 IGLV3-22A0A075B6J6 115 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 K7ENM7 598 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 ATP5DP30049 168 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 ALDH5A1P51649 535 aaPredicted RBP14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 VAMP7P51809 220 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 CYP1B1Q16678 543 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 APOBEC3HQ6NTF7 200 aaKnown RBP14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 KIF2BQ8N4N8 673 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 MORC4Q8TE76 937 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 C1orf54Q8WWF1 131 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 KAT5Q92993 513 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 PCDHB18PQ96TA0 734 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 WDR18Q9BV38 432 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 ARHGEF35A5YM69 484 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 FOXO6A8MYZ6 492 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 NDUFB10O96000 172 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 CYP3A4P08684 503 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 PRELPP51888 382 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 RWDD2BP57060 319 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 KRT17Q04695 432 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 ZNF268Q14587 947 aaPredicted RBP14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 NSMFQ6X4W1 530 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 ZNF653Q96CK0 615 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 FAM212AQ96EL1 285 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 ACP6Q9NPH0 428 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 CTNNAL1Q9UBT7 734 aa14.98□□□□□ -0.01
VPS9D1-202ENST00000561976 TISP43B9A030 160 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 CLDN3O15551 220 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 ZNF131P52739 623 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 COPS2P61201 443 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 PPP3CAQ08209 521 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 SGO2Q562F6 1265 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 INTS8Q75QN2 995 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 SIAH1Q8IUQ4 282 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 GBP7Q8N8V2 638 aaPredicted RBP14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 SERPINB12Q96P63 405 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 EBF2Q9HAK2 575 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 DDTLA6NHG4 134 aaPredicted RBP14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 HIP1RO75146 1068 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 PSMD10O75832 226 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 OAS1P00973 400 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 MMP14P50281 582 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 RRP1BQ14684 758 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 SPATA21Q7Z572 469 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 NOP9Q86U38 636 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 PRCCQ92733 491 aaPredicted RBP14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 CD101Q93033 1021 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 VTI1AQ96AJ9 217 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 IFT74Q96LB3 600 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 NOP53Q9NZM5 478 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 WRAP73Q9P2S5 460 aaPredicted RBP14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 C15orf41Q9Y2V0 281 aa14.97□□□□□ -0.01
VPS9D1-202ENST00000561976 CLGNO14967 610 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 CYP26A1O43174 497 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 BMP3P12645 472 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 STX2P32856 288 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 RBM5P52756 815 aaKnown RBP eCLIP14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 TCEAL1Q15170 157 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 TRIP13Q15645 432 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 VSTM1Q6UX27 236 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 SLC9A9Q8IVB4 645 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 SPICE1Q8N0Z3 855 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 PPM1KQ8N3J5 372 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 ARL2BPQ9Y2Y0 163 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 BRAFP15056 766 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 CHKAP35790 457 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 ADCY1Q08828 1119 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 PPP2R5CQ13362 524 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 SIX1Q15475 284 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 HHIPL2Q6UWX4 724 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 EPS8L1Q8TE68 723 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 PLVAPQ9BX97 442 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 PI4KBQ9UBF8 816 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 TBK1Q9UHD2 729 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 PNMA3Q9UL41 463 aa14.96□□□□□ -0.01
VPS9D1-202ENST00000561976 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 PPEF1O14829 653 aaPredicted RBP14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 THAP12O43422 761 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 KRT16P08779 473 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 CHRNB2P17787 502 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 PAX7P23759 505 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 CRKP46108 304 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 BNIP1Q12981 228 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 KYNUQ16719 465 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 TMEM179Q6ZVK1 233 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 SLC47A2Q86VL8 602 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 TGS1Q96RS0 853 aaKnown RBP14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 LRRC19Q9H756 370 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 AAASQ9NRG9 546 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 WHRNQ9P202 907 aa14.96□□□□□ -0.02
VPS9D1-202ENST00000561976 MTA2O94776 668 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 GH1P01241 217 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 MYCNP04198 464 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 GZMAP12544 262 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 VPS41P49754 854 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms