RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 B3GALT1Q9Y5Z6 326 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 FER1L6Q2WGJ9 1857 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 H7C1D1 291 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 BRINP1O60477 761 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 CLASP2O75122 1294 aaKnown RBP7.34□□□□□ -1.23
LRRC28-209ENST00000558861 HIP1RO75146 1068 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 JUNBP17275 347 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-209ENST00000558861 KPNA1P52294 538 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-209ENST00000558861 KIF11P52732 1056 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 GPSM2P81274 684 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 ATP8B2P98198 1209 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 TMEM62Q0P6H9 643 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 IFIT5Q13325 482 aaKnown RBP7.34□□□□□ -1.23
LRRC28-209ENST00000558861 SLC9A5Q14940 896 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 KIAA1958Q8N8K9 716 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 KLHDC4Q8TBB5 520 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 COG1Q8WTW3 980 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 STAG1Q8WVM7 1258 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 DIRC2Q96SL1 478 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 CDC5LQ99459 802 aaKnown RBP7.34□□□□□ -1.23
LRRC28-209ENST00000558861 PSMD1Q99460 953 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 PCIF1Q9H4Z3 704 aa7.34□□□□□ -1.23
LRRC28-209ENST00000558861 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.34□□□□□ -1.23
LRRC28-209ENST00000558861 PA2G4Q9UQ80 394 aaKnown RBP7.34□□□□□ -1.23
LRRC28-209ENST00000558861 ANKRD18BA2A2Z9 1011 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 ACOT7O00154 380 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 SNAP23O00161 211 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 ZEB2O60315 1214 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 BUB1BO60566 1050 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-209ENST00000558861 SLC9A1P19634 815 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 PMLP29590 882 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 ATP13A4Q4VNC1 1196 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 LRRC24Q50LG9 513 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 CCDC93Q567U6 631 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 BTBD8Q5XKL5 378 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 PRR23BQ6ZRT6 265 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 ANKRD18AQ8IVF6 992 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 TRIM48Q8IWZ4 208 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 ALG3Q92685 438 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 DLG3Q92796 817 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 ELF4Q99607 663 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-209ENST00000558861 ZNF552Q9H707 407 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-209ENST00000558861 KCNH7Q9NS40 1196 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 DDX56Q9NY93 547 aaKnown RBP7.33□□□□□ -1.24
LRRC28-209ENST00000558861 POLLQ9UGP5 575 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 HDAC5Q9UQL6 1122 aa7.33□□□□□ -1.24
LRRC28-209ENST00000558861 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-209ENST00000558861 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-209ENST00000558861 EYA2O00167 538 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 ABLIM1O14639 778 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 TGM5O43548 720 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 CIAO1O76071 339 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 C4BPAP04003 597 aaKnown RBP7.32□□□□□ -1.24
LRRC28-209ENST00000558861 FGFR2P21802 821 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 GJA4P35212 333 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 STAT5AP42229 794 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 CHRNDQ07001 517 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 TMEM132BQ14DG7 1078 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 ZNF174Q15697 407 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 GPR162Q16538 588 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 CCDC57Q2TAC2 916 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 LDHAL6AQ6ZMR3 332 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 C15orf52Q6ZUT6 534 aaKnown RBP7.32□□□□□ -1.24
LRRC28-209ENST00000558861 SPATS2Q86XZ4 545 aaKnown RBP7.32□□□□□ -1.24
LRRC28-209ENST00000558861 MIB1Q86YT6 1006 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 FAM126BQ8IXS8 530 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 RTKN2Q8IZC4 609 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 EFHBQ8N7U6 833 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 EXOC6Q8TAG9 804 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 TBC1D16Q8TBP0 767 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 NSUN3Q9H649 340 aaKnown RBP7.32□□□□□ -1.24
LRRC28-209ENST00000558861 HOMER2Q9NSB8 354 aa7.32□□□□□ -1.24
LRRC28-209ENST00000558861 XDHP47989 1333 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 A0A1B0GUL6 1792 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 PRAMEF25A6NGN4 478 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 HRKO00198 91 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 SASH1O94885 1247 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 ASGR2P07307 311 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 PTX3P26022 381 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-209ENST00000558861 KLRK1P26718 216 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 IGHMBP2P38935 993 aaKnown RBP7.31□□□□□ -1.24
LRRC28-209ENST00000558861 GUCY2FP51841 1108 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 SRSF3P84103 164 aaKnown RBP7.31□□□□□ -1.24
LRRC28-209ENST00000558861 OCRLQ01968 901 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 KIAA2012Q0VF49 1180 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 PAN2Q504Q3 1202 aaKnown RBP7.31□□□□□ -1.24
LRRC28-209ENST00000558861 RNF219Q5W0B1 726 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-209ENST00000558861 OLFML2BQ68BL8 750 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 ETV3LQ6ZN32 361 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 C11orf74Q86VG3 221 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 RPAP2Q8IXW5 612 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-209ENST00000558861 YIPF4Q9BSR8 244 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 TAOK3Q9H2K8 898 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 EPB41L4BQ9H329 900 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 ZNF277Q9NRM2 450 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-209ENST00000558861 SLC5A4Q9NY91 659 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 DTLQ9NZJ0 730 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 SPO11Q9Y5K1 396 aa7.31□□□□□ -1.24
LRRC28-209ENST00000558861 SBF1O95248 1867 aa7.3□□□□□ -1.24
LRRC28-209ENST00000558861 CACNA1SQ13698 1873 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms