RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 KDM6AO15550 1401 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 KNDC1Q76NI1 1749 aa5.96□□□□□ -1.45
MTHFD1-216ENST00000557539 ASH1LQ9NR48 2969 aaKnown RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 KIF1AQ12756 1690 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 GCC2Q8IWJ2 1684 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 ABHD14A-ACY1A0A1B0GW23 586 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 KLRG2A4D1S0 409 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 FAM227AF5H4B4 570 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 SLC27A2O14975 620 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 PIP5K1CO60331 668 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 BUB1BO60566 1050 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 TUSC2O75896 110 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 HRGP04196 525 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 CEACAM5P06731 702 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 CENPBP07199 599 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 CLCN7P51798 805 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 SLC5A3P53794 718 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 FAM193AP78312 1265 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 ALDH6A1Q02252 535 aaKnown RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 MOGSQ13724 837 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 PITRM1Q5JRX3 1037 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 CATSPEREQ5SY80 951 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 MROH9Q5TGP6 573 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 BTBD8Q5XKL5 378 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 KCTD1Q719H9 257 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 TMPRSS7Q7RTY8 843 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 VSIG10LQ86VR7 867 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 WFDC3Q8IUB2 231 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 LURAP1LQ8IV03 231 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 CPXCR1Q8N123 301 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 FLAD1Q8NFF5 587 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 MAFAQ8NHW3 353 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 ERCC4Q92889 916 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 COA7Q96BR5 231 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 GUCD1Q96NT3 240 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 TBCBQ99426 244 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 B3GNT5Q9BYG0 378 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 TMEM60Q9H2L4 133 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 POFUT1Q9H488 388 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 TAF1DQ9H5J8 278 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 CASS4Q9NQ75 786 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 SEMA3GQ9NS98 782 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 RNF186Q9NXI6 227 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 ANGEL1Q9UNK9 670 aaKnown RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 PLAGL2Q9UPG8 496 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 RNF114Q9Y508 228 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 MORC2Q9Y6X9 1032 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 CRB1P82279 1406 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 TRPM1Q7Z4N2 1603 aa5.96□□□□□ -1.46
MTHFD1-216ENST00000557539 PAPPA2Q9BXP8 1791 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 PRSS38A1L453 326 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 PRAMEF25A6NGN4 478 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 FAM90A27PA6NNH2 459 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 H3BML4 177 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 FOXP2O15409 715 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 DTNBO60941 627 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 DDNO94850 711 aaPredicted RBP5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 UBXN7O94888 489 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 APOL3O95236 402 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 ESR1P03372 595 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 MTHFD2P13995 350 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 PTPN1P18031 435 aaKnown RBP5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 KCNA3P22001 575 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 ITGB8P26012 769 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 FNTBP49356 437 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 MRPS9P82933 396 aaKnown RBP5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 SEMA5AQ13591 1074 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 PGS1Q32NB8 556 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 STEAP3Q658P3 488 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 CDC42BPGQ6DT37 1551 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 DARS2Q6PI48 645 aaKnown RBP5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 NME9Q86XW9 330 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 PHYKPLQ8IUZ5 450 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 LZTR1Q8N653 840 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 POF1BQ8WVV4 589 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 AUTS2Q8WXX7 1259 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 FERMT2Q96AC1 680 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 RAX2Q96IS3 184 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 CCDC138Q96M89 665 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 SCLT1Q96NL6 688 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 JMJD8Q96S16 334 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 MTA3Q9BTC8 594 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 BHMT2Q9H2M3 363 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 LRRC4CQ9HCJ2 640 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 KIAA1551Q9HCM1 1747 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 ATP13A1Q9HD20 1204 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 PAK6Q9NQU5 681 aaPredicted RBP5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 POLHQ9Y253 713 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 NUB1Q9Y5A7 615 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 AKAP12Q02952 1782 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 ARFGEF1Q9Y6D6 1849 aa5.95□□□□□ -1.46
MTHFD1-216ENST00000557539 ANKRD30BQ9BXX2 1392 aa5.94□□□□□ -1.46
MTHFD1-216ENST00000557539 ELL2O00472 640 aaPredicted RBP5.94□□□□□ -1.46
MTHFD1-216ENST00000557539 B3GALT2O43825 422 aa5.94□□□□□ -1.46
MTHFD1-216ENST00000557539 C4BPAP04003 597 aaKnown RBP5.94□□□□□ -1.46
MTHFD1-216ENST00000557539 SDHAP31040 664 aa5.94□□□□□ -1.46
MTHFD1-216ENST00000557539 GJA4P35212 333 aa5.94□□□□□ -1.46
MTHFD1-216ENST00000557539 TXKP42681 527 aa5.94□□□□□ -1.46
MTHFD1-216ENST00000557539 SLC16A1P53985 500 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms