RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZNF174Q15697 407 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 MTERF2Q49AM1 385 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 AKNAD1Q5T1N1 836 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 TAS1R1Q7RTX1 841 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 GPR149Q86SP6 731 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 IGSF22Q8N9C0 903 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 PIK3C3Q8NEB9 887 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 ACTRT2Q8TDY3 377 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 EXOC2Q96KP1 924 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 INTS7Q9NVH2 962 aaKnown RBP4.86□□□□□ -1.63
SRP54-207ENST00000555535 ATP11BQ9Y2G3 1177 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 MAP3K2Q9Y2U5 619 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 MSRB2Q9Y3D2 182 aa4.86□□□□□ -1.63
SRP54-207ENST00000555535 USP15Q9Y4E8 981 aaPredicted RBP4.86□□□□□ -1.63
SRP54-207ENST00000555535 MGST3O14880 152 aa4.85□□□□□ -1.63
SRP54-207ENST00000555535 KRT37O76014 449 aa4.85□□□□□ -1.63
SRP54-207ENST00000555535 CCKBRP32239 447 aa4.85□□□□□ -1.63
SRP54-207ENST00000555535 TRIM61Q5EBN2 209 aa4.85□□□□□ -1.63
SRP54-207ENST00000555535 ZFP28Q8NHY6 868 aa4.85□□□□□ -1.63
SRP54-207ENST00000555535 HASPINQ8TF76 798 aa4.85□□□□□ -1.63
SRP54-207ENST00000555535 TRIM55Q9BYV6 548 aa4.85□□□□□ -1.63
SRP54-207ENST00000555535 DMTF1Q9Y222 760 aa4.85□□□□□ -1.63
SRP54-207ENST00000555535 ZNF804BA4D1E1 1349 aa4.85□□□□□ -1.63
SRP54-207ENST00000555535 TBKBP1A7MCY6 615 aa4.84□□□□□ -1.63
SRP54-207ENST00000555535 H7C1D1 291 aa4.84□□□□□ -1.63
SRP54-207ENST00000555535 PDPK1O15530 556 aa4.84□□□□□ -1.63
SRP54-207ENST00000555535 ORC4O43929 436 aa4.84□□□□□ -1.63
SRP54-207ENST00000555535 CLEC2LP0C7M8 214 aa4.84□□□□□ -1.63
SRP54-207ENST00000555535 APBA1Q02410 837 aa4.84□□□□□ -1.63
SRP54-207ENST00000555535 RASGRF1Q13972 1273 aa4.84□□□□□ -1.63
SRP54-207ENST00000555535 TFAP2CQ92754 450 aa4.84□□□□□ -1.63
SRP54-207ENST00000555535 CASS4Q9NQ75 786 aa4.84□□□□□ -1.63
SRP54-207ENST00000555535 TCRBV16S1A1N1A0A5B0 115 aa4.83□□□□□ -1.64
SRP54-207ENST00000555535 NRP2O60462 931 aa4.83□□□□□ -1.64
SRP54-207ENST00000555535 PRPF6O94906 941 aaKnown RBP4.83□□□□□ -1.64
SRP54-207ENST00000555535 LY86O95711 162 aa4.83□□□□□ -1.64
SRP54-207ENST00000555535 MECP2P51608 486 aaKnown RBP4.83□□□□□ -1.64
SRP54-207ENST00000555535 PROK1P58294 105 aa4.83□□□□□ -1.64
SRP54-207ENST00000555535 CD69Q07108 199 aa4.83□□□□□ -1.64
SRP54-207ENST00000555535 ZNF517Q6ZMY9 492 aaPredicted RBP4.83□□□□□ -1.64
SRP54-207ENST00000555535 DDX53Q86TM3 631 aaKnown RBP4.83□□□□□ -1.64
SRP54-207ENST00000555535 CDC5LQ99459 802 aaKnown RBP4.83□□□□□ -1.64
SRP54-207ENST00000555535 TIMP4Q99727 224 aa4.83□□□□□ -1.64
SRP54-207ENST00000555535 PFDN2Q9UHV9 154 aa4.83□□□□□ -1.64
SRP54-207ENST00000555535 WIPF3A6NGB9 483 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 B4E1Z4 1266 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 DVL2O14641 736 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 APOL3O95236 402 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 FAM153BP0C7A2 387 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 KCNA6P17658 529 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 WT1P19544 449 aaPredicted RBP4.82□□□□□ -1.64
SRP54-207ENST00000555535 RBM25P49756 843 aaKnown RBP4.82□□□□□ -1.64
SRP54-207ENST00000555535 BMT2Q1RMZ1 405 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 CCDC178Q5BJE1 867 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 AGAP9Q5VTM2 703 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 RHOT2Q8IXI1 618 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 ZZZ3Q8IYH5 903 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 FAM43AQ8N2R8 423 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 KIAA1958Q8N8K9 716 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 CDYL2Q8N8U2 506 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 HIRIP3Q9BW71 556 aaPredicted RBP4.82□□□□□ -1.64
SRP54-207ENST00000555535 IGSF5Q9NSI5 407 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 TMEM74BQ9NUR3 256 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 PCDHB6Q9Y5E3 794 aa4.82□□□□□ -1.64
SRP54-207ENST00000555535 PRKCGP05129 697 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 GPD1P21695 349 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 XPAP23025 273 aaPredicted RBP4.81□□□□□ -1.64
SRP54-207ENST00000555535 GPR15P49685 360 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 CCT4P50991 539 aaKnown RBP4.81□□□□□ -1.64
SRP54-207ENST00000555535 SOX10P56693 466 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 C11orf87Q6NUJ2 197 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 MAPKAPK5Q8IW41 473 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 TMEM132CQ8N3T6 1108 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 CHST14Q8NCH0 376 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 SARAFQ96BY9 339 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 SCLYQ96I15 445 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 BOD1Q96IK1 185 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 AIFM2Q9BRQ8 373 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 MYL10Q9BUA6 226 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 REXO4Q9GZR2 422 aaKnown RBP4.81□□□□□ -1.64
SRP54-207ENST00000555535 MTFR1LQ9H019 292 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 ASB6Q9NWX5 421 aa4.81□□□□□ -1.64
SRP54-207ENST00000555535 CCDC85CA6NKD9 419 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 KCNQ2O43526 872 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 RANGAP1P46060 587 aaPredicted RBP4.8□□□□□ -1.64
SRP54-207ENST00000555535 NRG3P56975 720 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 FHL1Q13642 323 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 METRNLQ641Q3 311 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 ABHD17CQ6PCB6 329 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 PDZD4Q76G19 769 aaPredicted RBP4.8□□□□□ -1.64
SRP54-207ENST00000555535 THNSL2Q86YJ6 484 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 WACQ9BTA9 647 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 CCDC113Q9H0I3 377 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 GALNT9Q9HCQ5 603 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 PODXL2Q9NZ53 605 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 FLRT1Q9NZU1 646 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 ENTPD2Q9Y5L3 495 aa4.8□□□□□ -1.64
SRP54-207ENST00000555535 MYPNQ86TC9 1320 aa4.79□□□□□ -1.64
SRP54-207ENST00000555535 CCDC163A0A0D9SF12 145 aa4.79□□□□□ -1.64
SRP54-207ENST00000555535 CCDC151A5D8V7 595 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms