RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 AARSP49588 968 aaKnown RBP eCLIP26.22■■□□□ 1.79
TMEM260-207ENST00000555497 TAF3Q5VWG9 929 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 SLC47A2Q86VL8 602 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 PAGR1Q9BTK6 254 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 GDF3Q9NR23 364 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 FBXO40Q9UH90 709 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 A0A0G2JLL6 359 aaPredicted RBP26.21■■□□□ 1.79
TMEM260-207ENST00000555497 ESYT3A0FGR9 886 aa26.21■■□□□ 1.79
TMEM260-207ENST00000555497 CNMDO75829 334 aa26.21■■□□□ 1.79
TMEM260-207ENST00000555497 FARP2O94887 1054 aaPredicted RBP26.21■■□□□ 1.79
TMEM260-207ENST00000555497 HEXIM1O94992 359 aaKnown RBP26.21■■□□□ 1.79
TMEM260-207ENST00000555497 GLRA2P23416 452 aa26.21■■□□□ 1.79
TMEM260-207ENST00000555497 PRRT2Q7Z6L0 340 aaPredicted RBP26.21■■□□□ 1.79
TMEM260-207ENST00000555497 KLHL7Q8IXQ5 586 aa26.21■■□□□ 1.79
TMEM260-207ENST00000555497 FBXL13Q8NEE6 735 aa26.21■■□□□ 1.79
TMEM260-207ENST00000555497 ZNF516Q92618 1163 aa26.21■■□□□ 1.79
TMEM260-207ENST00000555497 TATDN2Q93075 761 aa26.21■■□□□ 1.79
TMEM260-207ENST00000555497 RAB20Q9NX57 234 aa26.21■■□□□ 1.79
TMEM260-207ENST00000555497 VPS18Q9P253 973 aa26.21■■□□□ 1.79
TMEM260-207ENST00000555497 CARSP49589 748 aaKnown RBP26.2■■□□□ 1.79
TMEM260-207ENST00000555497 MFAP3P55082 362 aa26.2■■□□□ 1.79
TMEM260-207ENST00000555497 WNT7BP56706 349 aa26.2■■□□□ 1.79
TMEM260-207ENST00000555497 AP1M1Q9BXS5 423 aa26.2■■□□□ 1.79
TMEM260-207ENST00000555497 HAPLN2Q9GZV7 340 aa26.2■■□□□ 1.79
TMEM260-207ENST00000555497 PORCNQ9H237 461 aa26.2■■□□□ 1.79
TMEM260-207ENST00000555497 EPB41L5Q9HCM4 733 aa26.2■■□□□ 1.79
TMEM260-207ENST00000555497 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.2■■□□□ 1.79
TMEM260-207ENST00000555497 RNF181Q9P0P0 153 aa26.2■■□□□ 1.79
TMEM260-207ENST00000555497 ADAM21Q9UKJ8 722 aa26.2■■□□□ 1.79
TMEM260-207ENST00000555497 AMFRQ9UKV5 643 aa26.2■■□□□ 1.79
TMEM260-207ENST00000555497 A0A0U1RQG5 324 aaPredicted RBP26.2■■□□□ 1.78
TMEM260-207ENST00000555497 DDX3YO15523 660 aaKnown RBP26.2■■□□□ 1.78
TMEM260-207ENST00000555497 RAD51CO43502 376 aa26.2■■□□□ 1.78
TMEM260-207ENST00000555497 PHACTR2O75167 634 aa26.2■■□□□ 1.78
TMEM260-207ENST00000555497 FAM193AP78312 1265 aa26.2■■□□□ 1.78
TMEM260-207ENST00000555497 GUCY2DQ02846 1103 aa26.2■■□□□ 1.78
TMEM260-207ENST00000555497 TRADDQ15628 312 aa26.2■■□□□ 1.78
TMEM260-207ENST00000555497 RASGEF1CQ8N431 466 aa26.2■■□□□ 1.78
TMEM260-207ENST00000555497 DHX38Q92620 1227 aaKnown RBP26.2■■□□□ 1.78
TMEM260-207ENST00000555497 PI4K2AQ9BTU6 479 aa26.2■■□□□ 1.78
TMEM260-207ENST00000555497 ASCC2Q9H1I8 757 aaPredicted RBP26.2■■□□□ 1.78
TMEM260-207ENST00000555497 NOC2LQ9Y3T9 749 aaKnown RBP26.2■■□□□ 1.78
TMEM260-207ENST00000555497 ZNFX1Q9P2E3 1918 aaKnown RBP26.2■■□□□ 1.78
TMEM260-207ENST00000555497 AGPSO00116 658 aa26.19■■□□□ 1.78
TMEM260-207ENST00000555497 GTF2H1P32780 548 aa26.19■■□□□ 1.78
TMEM260-207ENST00000555497 ARL2P36404 184 aa26.19■■□□□ 1.78
TMEM260-207ENST00000555497 EEPD1Q7L9B9 569 aa26.19■■□□□ 1.78
TMEM260-207ENST00000555497 RIN2Q8WYP3 895 aaPredicted RBP26.19■■□□□ 1.78
TMEM260-207ENST00000555497 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.19■■□□□ 1.78
TMEM260-207ENST00000555497 NIFKQ9BYG3 293 aaKnown RBP26.19■■□□□ 1.78
TMEM260-207ENST00000555497 ACBD3Q9H3P7 528 aa26.19■■□□□ 1.78
TMEM260-207ENST00000555497 LIG4P49917 911 aa26.19■■□□□ 1.78
TMEM260-207ENST00000555497 FAM71BQ8TC56 605 aa26.19■■□□□ 1.78
TMEM260-207ENST00000555497 CHORDC1Q9UHD1 332 aaPredicted RBP26.19■■□□□ 1.78
TMEM260-207ENST00000555497 PGRMC1O00264 195 aaKnown RBP26.18■■□□□ 1.78
TMEM260-207ENST00000555497 MMEP08473 750 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 IRX3P78415 501 aaPredicted RBP26.18■■□□□ 1.78
TMEM260-207ENST00000555497 DCAF12L1Q5VU92 463 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 LMBRD2Q68DH5 695 aaPredicted RBP26.18■■□□□ 1.78
TMEM260-207ENST00000555497 PROCA1Q8NCQ7 364 aaPredicted RBP26.18■■□□□ 1.78
TMEM260-207ENST00000555497 ZBTB45Q96K62 511 aaPredicted RBP26.18■■□□□ 1.78
TMEM260-207ENST00000555497 NT5C1BQ96P26 610 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 FHDC1Q9C0D6 1143 aaPredicted RBP26.18■■□□□ 1.78
TMEM260-207ENST00000555497 ZNF233A6NK53 670 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 EDN1P05305 212 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 ITGA4P13612 1032 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 CYP2C19P33261 490 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 IREB2P48200 963 aaKnown RBP26.18■■□□□ 1.78
TMEM260-207ENST00000555497 EPHB4P54760 987 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 FMO1Q01740 532 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 C15orf39Q6ZRI6 1047 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 IFT20Q8IY31 132 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 CASKIN2Q8WXE0 1202 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 TXNRD2Q9NNW7 524 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 MED4Q9NPJ6 270 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 STYXL1Q9Y6J8 313 aa26.18■■□□□ 1.78
TMEM260-207ENST00000555497 LRRC37A2A6NM11 1700 aa26.17■■□□□ 1.78
TMEM260-207ENST00000555497 H0YCG3 227 aa26.17■■□□□ 1.78
TMEM260-207ENST00000555497 EXTL3O43909 919 aa26.17■■□□□ 1.78
TMEM260-207ENST00000555497 GGCXP38435 758 aa26.17■■□□□ 1.78
TMEM260-207ENST00000555497 NLRP11P59045 1033 aaKnown RBP26.17■■□□□ 1.78
TMEM260-207ENST00000555497 TNNC1P63316 161 aa26.17■■□□□ 1.78
TMEM260-207ENST00000555497 TARBP2Q15633 366 aaKnown RBP26.17■■□□□ 1.78
TMEM260-207ENST00000555497 TSEN2Q8NCE0 465 aaKnown RBP26.17■■□□□ 1.78
TMEM260-207ENST00000555497 NFU1Q9UMS0 254 aa26.17■■□□□ 1.78
TMEM260-207ENST00000555497 SIP14410 1827 aa26.17■■□□□ 1.78
TMEM260-207ENST00000555497 LRRIQ4A6NIV6 560 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 RTN2O75298 545 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 CALCAP01258 141 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 FAM153BP0C7A2 387 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 ACOT2P49753 483 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 KCTD19Q17RG1 926 aaPredicted RBP26.16■■□□□ 1.78
TMEM260-207ENST00000555497 LY6KQ17RY6 165 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 FAM153CQ494X1 144 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 HSP90B2PQ58FF3 399 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 PSPC1Q8WXF1 523 aaKnown RBP26.16■■□□□ 1.78
TMEM260-207ENST00000555497 FAM153AQ9UHL3 310 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 SOCS7O14512 581 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 PGK2P07205 417 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 CYP11B1P15538 503 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms