RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 PSMC1P62191 440 aaKnown RBP14.8□□□□□ -0.04
VTI1B-204ENST00000554659 ANGPTL8Q6UXH0 198 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 RMDN2Q96LZ7 410 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 RNF17Q9BXT8 1623 aaKnown RBP14.8□□□□□ -0.04
VTI1B-204ENST00000554659 GPD1LQ8N335 351 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 CELF1Q92879 486 aaKnown RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 MASTLQ96GX5 879 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 STK33Q9BYT3 514 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 SLC13A4Q9UKG4 626 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 RNF103-CHMP3A0A140T963 221 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 CYP19A1P11511 503 aaPredicted RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 MARK3P27448 753 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 MORF4L2Q15014 288 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 CCDC90BQ9GZT6 254 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 WWP1Q9H0M0 922 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 L3MBTL1Q9Y468 752 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 CFAP69A5D8W1 941 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 FLOT2Q14254 428 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 EPHA7Q15375 998 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF568Q3ZCX4 644 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 HEATR6Q6AI08 1181 aaKnown RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 CNPY4Q8N129 248 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 HNRNPLLQ8WVV9 542 aaKnown RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 PRMT1Q99873 361 aaKnown RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 C2orf40Q9H1Z8 148 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 UVRAGQ9P2Y5 699 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 FBXO40Q9UH90 709 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 SPATA31A3Q5VYP0 1347 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 CCDC195A0A1B0GUA6 201 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 PHKA2P46019 1235 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 RWDD4Q6NW29 188 aaKnown RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 NSUN6Q8TEA1 469 aaKnown RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF512BQ96KM6 892 aaPredicted RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 TOPORSQ9NS56 1045 aaPredicted RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 TULP4Q9NRJ4 1543 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 TCP11X1B4DZS4 312 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 RAP1GDS1P52306 607 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 C12orf60Q5U649 245 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 CAPRIN2Q6IMN6 1127 aaKnown RBP14.79□□□□□ -0.04
VTI1B-204ENST00000554659 DSTYKQ6XUX3 929 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 MS4A14Q96JA4 679 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 GTSE1Q9NYZ3 720 aa14.79□□□□□ -0.04
VTI1B-204ENST00000554659 MYO3BQ8WXR4 1341 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 PITPNM2Q9BZ72 1349 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 F8W8V4 182 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 M0QYV0 167 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 KIF1CO43896 1103 aaKnown RBP14.78□□□□□ -0.04
VTI1B-204ENST00000554659 DIAPH2O60879 1101 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 BCAR1P56945 870 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 SH2D3CQ8N5H7 860 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 RAPGEF5Q92565 580 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 AGPAT5Q9NUQ2 364 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 TEKT2Q9UIF3 430 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF189O75820 626 aaPredicted RBP14.78□□□□□ -0.04
VTI1B-204ENST00000554659 ARSEP51690 589 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 ICA1LQ8NDH6 482 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 POLD4Q9HCU8 107 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 PCSK1NQ9UHG2 260 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF711Q9Y462 761 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 ARHGAP10A1A4S6 786 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 F5H6K3 240 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 CHN1P15882 459 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 CIITAP33076 1130 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 CACNB3P54284 484 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 KLRC3Q07444 240 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 HIF1AQ16665 826 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 RTKN2Q8IZC4 609 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 TRABDQ9H4I3 376 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 AXIN2Q9Y2T1 843 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 RASSF10A6NK89 507 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 ARHGEF9O43307 516 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 GYPCP04921 128 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 ITIH2P19823 946 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 CATSPER4Q7RTX7 472 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 PODNQ7Z5L7 613 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 MMGT1Q8N4V1 131 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 FAM84BQ96KN1 310 aaPredicted RBP14.78□□□□□ -0.04
VTI1B-204ENST00000554659 TIPINQ9BVW5 301 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 PPCSQ9HAB8 311 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 APEX2Q9UBZ4 518 aa14.78□□□□□ -0.04
VTI1B-204ENST00000554659 CDH16O75309 829 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 NEK2P51955 445 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 NAB2Q15742 525 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 HAUS6Q7Z4H7 955 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 SLC35G2Q8TBE7 412 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 FSD1LQ9BXM9 530 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF302Q9NR11 478 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 STAP1Q9ULZ2 295 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 CDC42BPAQ5VT25 1732 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 ZFXP17010 805 aaPredicted RBP14.77□□□□□ -0.04
VTI1B-204ENST00000554659 STAMBPL1Q96FJ0 436 aa14.77□□□□□ -0.04
VTI1B-204ENST00000554659 RBM12Q9NTZ6 932 aaKnown RBP14.77□□□□□ -0.04
VTI1B-204ENST00000554659 USP15Q9Y4E8 981 aaPredicted RBP14.77□□□□□ -0.04
VTI1B-204ENST00000554659 FAM205CA6NFA0 338 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 SERPINB4P48594 390 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 EDRF1Q3B7T1 1238 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 KRT27Q7Z3Y8 459 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 TTC8Q8TAM2 541 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 PDS5AQ29RF7 1337 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms