RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 LRRC71Q8N4P6 559 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 FAM71BQ8TC56 605 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 SLC20A1Q8WUM9 679 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 NOX5Q96PH1 765 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 PI4K2AQ9BTU6 479 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 CHORDC1Q9UHD1 332 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-212ENST00000554467 NAGPAQ9UK23 515 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 GTPBP10A4D1E9 387 aaKnown RBP12.64□□□□□ -0.39
SHMT2-212ENST00000554467 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 ABCB4P21439 1286 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 EDNRBP24530 442 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 ICAM3P32942 547 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 SOX5P35711 763 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 MXI1P50539 228 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 STAT5BP51692 787 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 WNT7BP56706 349 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 ALCAMQ13740 583 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 ZBTB41Q5SVQ8 909 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 MCPH1Q8NEM0 835 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 LNX1Q8TBB1 728 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-212ENST00000554467 TAS2R14Q9NYV8 317 aa12.64□□□□□ -0.39
SHMT2-212ENST00000554467 GLRA2P23416 452 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 ERVK-9P63128 1117 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 PPM1KQ8N3J5 372 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 ZC3H15Q8WU90 426 aaKnown RBP12.63□□□□□ -0.39
SHMT2-212ENST00000554467 RIN2Q8WYP3 895 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-212ENST00000554467 ALS2CR12Q96Q35 445 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 NOP56O00567 594 aaKnown RBP12.63□□□□□ -0.39
SHMT2-212ENST00000554467 PJA2O43164 708 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 ERLIN2O94905 339 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 CLSTN1O94985 981 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 OSBPP22059 807 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 SLC7A3Q8WY07 619 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 PPP1R16BQ96T49 567 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 TIPINQ9BVW5 301 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 STK33Q9BYT3 514 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 ST6GALNAC4Q9H4F1 302 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 EXOC7Q9UPT5 735 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 ZC3H4Q9UPT8 1303 aaKnown RBP12.63□□□□□ -0.39
SHMT2-212ENST00000554467 DKC1O60832 514 aaKnown RBP eCLIP12.63□□□□□ -0.39
SHMT2-212ENST00000554467 RNF40O75150 1001 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 LIG4P49917 911 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 SNAPC2Q13487 334 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 TAS1R2Q8TE23 839 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 TARS2Q9BW92 718 aaKnown RBP12.63□□□□□ -0.39
SHMT2-212ENST00000554467 TLR10Q9BXR5 811 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 SNX12Q9UMY4 172 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 HYOU1Q9Y4L1 999 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 ARID2Q68CP9 1835 aa12.63□□□□□ -0.39
SHMT2-212ENST00000554467 ATG7O95352 703 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 SRGAP2CP0DJJ0 459 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 MNAT1P51948 309 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 NAB2Q15742 525 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 FASTKD5Q7L8L6 764 aaKnown RBP12.62□□□□□ -0.39
SHMT2-212ENST00000554467 DHX38Q92620 1227 aaKnown RBP12.62□□□□□ -0.39
SHMT2-212ENST00000554467 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 HAPLN2Q9GZV7 340 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 NLRP11P59045 1033 aaKnown RBP12.62□□□□□ -0.39
SHMT2-212ENST00000554467 SCARA3Q6AZY7 606 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 DEPTORQ8TB45 409 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 PPP1R13LQ8WUF5 828 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 SPIRE2Q8WWL2 714 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 OSBPL9Q96SU4 736 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 PDHXO00330 501 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 FERP16591 822 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 SCP2P22307 547 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 EPC2Q52LR7 807 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 LDLRAD1Q5T700 205 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 CDR2LQ86X02 465 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-212ENST00000554467 OLIG1Q8TAK6 271 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 NTPCRQ9BSD7 190 aaKnown RBP12.62□□□□□ -0.39
SHMT2-212ENST00000554467 ARHGAP28Q9P2N2 729 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 LOC285556D6RIA3 1793 aa12.62□□□□□ -0.39
SHMT2-212ENST00000554467 GRID2IPA4D2P6 1211 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 TXNP10599 105 aaKnown RBP12.61□□□□□ -0.39
SHMT2-212ENST00000554467 IGBP1P78318 339 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 NEDD9Q14511 834 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 METTL7BQ6UX53 244 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 CREG2Q8IUH2 290 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 C12orf56Q8IXR9 622 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 PRPF31Q8WWY3 499 aaKnown RBP12.61□□□□□ -0.39
SHMT2-212ENST00000554467 SEPT1Q8WYJ6 367 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 RABEP2Q9H5N1 569 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 DHX33Q9H6R0 707 aaKnown RBP12.61□□□□□ -0.39
SHMT2-212ENST00000554467 AZI2Q9H6S1 392 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 A0A0G2JMZ2 1700 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 CCL15-CCL14A0A0B4J2E2 113 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 K7ERI5 159 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 CSDE1O75534 798 aaKnown RBP12.61□□□□□ -0.39
SHMT2-212ENST00000554467 SLC25A27O95847 323 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 PRKCIP41743 596 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 PPARDQ03181 441 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 CCL15Q16663 113 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 ZBTB33Q86T24 672 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 TATDN2Q93075 761 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 KREMEN1Q96MU8 473 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 OSGEPQ9NPF4 335 aa12.61□□□□□ -0.39
SHMT2-212ENST00000554467 LUC7LQ9NQ29 371 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms