RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 MRPL11Q9Y3B7 192 aaKnown RBP25.38■■□□□ 1.65
NPAS3-211ENST00000551634 SMIM23A6NLE4 172 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 ARP10275 920 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 SLC8A1P32418 973 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 SIX1Q15475 284 aaPredicted RBP25.37■■□□□ 1.65
NPAS3-211ENST00000551634 DACT2Q5SW24 774 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 PADI6Q6TGC4 694 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 XXYLT1Q8NBI6 393 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 EPS8L3Q8TE67 593 aaKnown RBP25.37■■□□□ 1.65
NPAS3-211ENST00000551634 LRRC19Q9H756 370 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 UVRAGQ9P2Y5 699 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 ATP2C2O75185 946 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 GCLMP48507 274 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 MCCD1P59942 119 aaPredicted RBP25.37■■□□□ 1.65
NPAS3-211ENST00000551634 ZNF568Q3ZCX4 644 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 C1orf220Q5T0J3 134 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 MSL1Q68DK7 614 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 SPICE1Q8N0Z3 855 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 PRMT1Q99873 361 aaKnown RBP25.37■■□□□ 1.65
NPAS3-211ENST00000551634 HOMER3Q9NSC5 361 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 GTF3C4Q9UKN8 822 aa25.37■■□□□ 1.65
NPAS3-211ENST00000551634 SGPL1O95470 568 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 FGFR4P22455 802 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 CALCOCO2Q13137 446 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 FAM228AQ86W67 206 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 ZNF564Q8TBZ8 553 aaPredicted RBP25.36■■□□□ 1.65
NPAS3-211ENST00000551634 PCIF1Q9H4Z3 704 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 ARHGEF10LQ9HCE6 1279 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 IPO5O00410 1097 aaKnown RBP25.36■■□□□ 1.65
NPAS3-211ENST00000551634 SPOPO43791 374 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 RARAP10276 462 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 RWDD2BP57060 319 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 CNGA2Q16280 664 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 ZNF746Q6NUN9 644 aaPredicted RBP25.36■■□□□ 1.65
NPAS3-211ENST00000551634 NOP9Q86U38 636 aaKnown RBP25.36■■□□□ 1.65
NPAS3-211ENST00000551634 PLVAPQ9BX97 442 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.36■■□□□ 1.65
NPAS3-211ENST00000551634 COL2A1P02458 1487 aaPredicted RBP25.36■■□□□ 1.65
NPAS3-211ENST00000551634 ECEL1O95672 775 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 MXI1P50539 228 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 RANBP17Q9H2T7 1088 aaKnown RBP25.36■■□□□ 1.65
NPAS3-211ENST00000551634 WHRNQ9P202 907 aa25.36■■□□□ 1.65
NPAS3-211ENST00000551634 PDE6CP51160 858 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 RASA3Q14644 834 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 ZNF772Q68DY9 489 aaPredicted RBP25.35■■□□□ 1.65
NPAS3-211ENST00000551634 NUP85Q9BW27 656 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 CXorf56Q9H5V9 222 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 FAM170AA1A519 330 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 VIMP08670 466 aaKnown RBP25.35■■□□□ 1.65
NPAS3-211ENST00000551634 UBXN2AP68543 259 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 ELF3P78545 371 aaPredicted RBP25.35■■□□□ 1.65
NPAS3-211ENST00000551634 TRPM8Q7Z2W7 1104 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 ELAC2Q9BQ52 826 aaKnown RBP25.35■■□□□ 1.65
NPAS3-211ENST00000551634 CBWD1Q9BRT8 395 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 ST6GALNAC4Q9H4F1 302 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 HSPBP1Q9NZL4 362 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 MCM8Q9UJA3 840 aa25.35■■□□□ 1.65
NPAS3-211ENST00000551634 TCRBV7S2A1N4TA0A589 114 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 MIGA2Q7L4E1 593 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 GPATCH11Q8N954 259 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 CHURC1Q8WUH1 139 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 SHC3Q92529 594 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 SERPINB12Q96P63 405 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 DBR1Q9UK59 544 aaKnown RBP25.34■■□□□ 1.65
NPAS3-211ENST00000551634 TMX2Q9Y320 296 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 CFAP73A6NFT4 308 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 C21orf2O43822 256 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 MFAP3P55082 362 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 RRP1BQ14684 758 aaKnown RBP25.34■■□□□ 1.65
NPAS3-211ENST00000551634 TMEM117Q9H0C3 514 aa25.34■■□□□ 1.65
NPAS3-211ENST00000551634 ANKRD63C9JTQ0 380 aa25.33■■□□□ 1.65
NPAS3-211ENST00000551634 FSCN2O14926 492 aa25.33■■□□□ 1.65
NPAS3-211ENST00000551634 P4HBP07237 508 aaKnown RBP25.33■■□□□ 1.65
NPAS3-211ENST00000551634 PLS3P13797 630 aa25.33■■□□□ 1.65
NPAS3-211ENST00000551634 ATP5DP30049 168 aa25.33■■□□□ 1.65
NPAS3-211ENST00000551634 FMO1Q01740 532 aa25.33■■□□□ 1.65
NPAS3-211ENST00000551634 UBAP2Q5T6F2 1119 aaKnown RBP25.33■■□□□ 1.65
NPAS3-211ENST00000551634 RNF207Q6ZRF8 634 aa25.33■■□□□ 1.65
NPAS3-211ENST00000551634 EXOC3L1Q86VI1 746 aa25.33■■□□□ 1.65
NPAS3-211ENST00000551634 MXRA8Q9BRK3 442 aa25.33■■□□□ 1.65
NPAS3-211ENST00000551634 SLCO1A2P46721 670 aa25.33■■□□□ 1.64
NPAS3-211ENST00000551634 UHMK1Q8TAS1 419 aaKnown RBP25.33■■□□□ 1.64
NPAS3-211ENST00000551634 KAT5Q92993 513 aa25.33■■□□□ 1.64
NPAS3-211ENST00000551634 IWS1Q96ST2 819 aa25.33■■□□□ 1.64
NPAS3-211ENST00000551634 HERC5Q9UII4 1024 aaKnown RBP25.33■■□□□ 1.64
NPAS3-211ENST00000551634 PTPN22Q9Y2R2 807 aa25.33■■□□□ 1.64
NPAS3-211ENST00000551634 SLX4Q8IY92 1834 aa25.33■■□□□ 1.64
NPAS3-211ENST00000551634 EZRP15311 586 aaKnown RBP25.32■■□□□ 1.64
NPAS3-211ENST00000551634 GTF2BQ00403 316 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 PPP1R7Q15435 360 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 CCDC174Q6PII3 467 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 MIER3Q7Z3K6 550 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 CCDC63Q8NA47 563 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 GIMAP7Q8NHV1 300 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 KREMEN1Q96MU8 473 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 ZNF536O15090 1300 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 SNX3O60493 162 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 SYDE1Q6ZW31 735 aaPredicted RBP25.32■■□□□ 1.64
NPAS3-211ENST00000551634 PLEKHO2Q8TD55 490 aa25.32■■□□□ 1.64
NPAS3-211ENST00000551634 ZNF653Q96CK0 615 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms