RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 THNSL1Q8IYQ7 743 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 KIAA0319LQ8IZA0 1049 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 KIFAP3Q92845 792 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 CCDC47Q96A33 483 aaKnown RBP13.3□□□□□ -0.28
HDAC7-226ENST00000547259 TMEM143Q96AN5 459 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 MAP7D2Q96T17 732 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 POLR3FQ9H1D9 316 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-226ENST00000547259 TMX1Q9H3N1 280 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 ZHX3Q9H4I2 956 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 NGRNQ9NPE2 291 aaKnown RBP13.3□□□□□ -0.28
HDAC7-226ENST00000547259 GPRC5CQ9NQ84 441 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 CLEC1BQ9P126 229 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 ODF2LQ9ULJ1 636 aa13.3□□□□□ -0.28
HDAC7-226ENST00000547259 IGKV6-21A0A0C4DH24 114 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 C9IYK1 514 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 FGF18O76093 207 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 CSPG5O95196 566 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 SMC2O95347 1197 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 HOXB8P17481 243 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-226ENST00000547259 PTPN5P54829 565 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 FAM189BP81408 668 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 CDC42EP1Q00587 391 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 PLCB3Q01970 1234 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 DPYDQ12882 1025 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 CNNM4Q6P4Q7 775 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 TMEM184AQ6ZMB5 413 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 RBM23Q86U06 439 aaKnown RBP13.29□□□□□ -0.28
HDAC7-226ENST00000547259 CCDC65Q8IXS2 484 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 ABI1Q8IZP0 508 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
HDAC7-226ENST00000547259 ERCC4Q92889 916 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-226ENST00000547259 SMARCE1Q969G3 411 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 PBXIP1Q96AQ6 731 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 DNAJC19Q96DA6 116 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 POLD4Q9HCU8 107 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 EXOC1Q9NV70 894 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 PANK4Q9NVE7 773 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 TMEM63CQ9P1W3 806 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-226ENST00000547259 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
HDAC7-226ENST00000547259 NOC2LQ9Y3T9 749 aaKnown RBP13.29□□□□□ -0.28
HDAC7-226ENST00000547259 USP15Q9Y4E8 981 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-226ENST00000547259 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 M0R296 226 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 RPN1P04843 607 aaKnown RBP13.28□□□□□ -0.28
HDAC7-226ENST00000547259 GAP43P17677 238 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 ZXDAP98168 799 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 MAPK7Q13164 816 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 DRP2Q13474 957 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 DUSP6Q16828 381 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 UNC13DQ70J99 1090 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 ADGRD2Q7Z7M1 963 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 RHPN2Q8IUC4 686 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 DAW1Q8N136 415 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 MYCT1Q8N699 235 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 LINC01465Q8N7H1 131 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 COLGALT1Q8NBJ5 622 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 IFT74Q96LB3 600 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 PARVGQ9HBI0 331 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 TYW1Q9NV66 732 aaKnown RBP13.28□□□□□ -0.28
HDAC7-226ENST00000547259 COL4A3BPQ9Y5P4 624 aa13.28□□□□□ -0.28
HDAC7-226ENST00000547259 MYO10Q9HD67 2058 aa13.27□□□□□ -0.28
HDAC7-226ENST00000547259 PVALEFA0A1B0GWK0 134 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 SFI1A8K8P3 1242 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 VTNP04004 478 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 ARL2P36404 184 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 NUBP1P53384 320 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 SIGLEC14Q08ET2 396 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 DMP1Q13316 513 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-226ENST00000547259 MXD4Q14582 209 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-226ENST00000547259 PPP2R5AQ15172 486 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 SFR1Q86XK3 245 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 ASAP3Q8TDY4 903 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 PRPF31Q8WWY3 499 aaKnown RBP13.27□□□□□ -0.29
HDAC7-226ENST00000547259 SCLT1Q96NL6 688 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 PPP1R16BQ96T49 567 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 RMND1Q9NWS8 449 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 LARSQ9P2J5 1176 aaKnown RBP13.27□□□□□ -0.29
HDAC7-226ENST00000547259 BARX2Q9UMQ3 279 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-226ENST00000547259 PCDHA5Q9Y5H7 936 aa13.27□□□□□ -0.29
HDAC7-226ENST00000547259 PTPRZ1P23471 2315 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-226ENST00000547259 FRMD3A2A2Y4 597 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 LRRIQ4A6NIV6 560 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 KLRC4O43908 158 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 GLP2RO95838 553 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 EOMESO95936 686 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 PLS3P13797 630 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 IBSPP21815 317 aaPredicted RBP13.26□□□□□ -0.29
HDAC7-226ENST00000547259 GLRA2P23416 452 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 EIF4BP23588 611 aaKnown RBP13.26□□□□□ -0.29
HDAC7-226ENST00000547259 ZNF131P52739 623 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 PEX3P56589 373 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 LAMTOR4Q0VGL1 99 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 CAPSQ13938 189 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 TFDP1Q14186 410 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 KIZQ2M2Z5 673 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 KMT5BQ4FZB7 885 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 FAM228AQ86W67 206 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 LRRC43Q8N309 656 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms