RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 CEP89Q96ST8 783 aa13.46□□□□□ -0.25
BRF1-207ENST00000546417 RIT2Q99578 217 aa13.46□□□□□ -0.25
BRF1-207ENST00000546417 IFT122Q9HBG6 1241 aa13.46□□□□□ -0.25
BRF1-207ENST00000546417 RBM8AQ9Y5S9 174 aaKnown RBP13.46□□□□□ -0.25
BRF1-207ENST00000546417 CEP295Q9C0D2 2601 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 ARL5CA6NH57 179 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 CHMP2AO43633 222 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 GDF9O60383 454 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 GAS7O60861 476 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 MAFO75444 373 aaPredicted RBP13.45□□□□□ -0.26
BRF1-207ENST00000546417 PROS1P07225 676 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 TDGF1P13385 188 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 RPL17P18621 184 aaKnown RBP13.45□□□□□ -0.26
BRF1-207ENST00000546417 CHMLP26374 656 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 CCR3P51677 355 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 AAMPQ13685 434 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 SIM2Q14190 667 aaPredicted RBP13.45□□□□□ -0.26
BRF1-207ENST00000546417 UBXN11Q5T124 520 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 N4BP2L1Q5TBK1 243 aaPredicted RBP13.45□□□□□ -0.26
BRF1-207ENST00000546417 FUT10Q6P4F1 479 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 SRGAP1Q7Z6B7 1085 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 RDM1Q8NG50 284 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 ITFG1Q8TB96 612 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 B3GALT6Q96L58 329 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 GPR62Q9BZJ7 368 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 CHRDQ9H2X0 955 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 HEBP1Q9NRV9 189 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 FBXW11Q9UKB1 542 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 ADAM28Q9UKQ2 775 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 KCNH3Q9ULD8 1083 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 POLIQ9UNA4 740 aa13.45□□□□□ -0.26
BRF1-207ENST00000546417 F8W810 466 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 MAN2B1O00754 1011 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 SGSM2O43147 1006 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 ECI2O75521 394 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 HOXA11P31270 313 aaPredicted RBP13.44□□□□□ -0.26
BRF1-207ENST00000546417 CNR2P34972 360 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 MLH1P40692 756 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 FUT2Q10981 343 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 LRCH2Q5VUJ6 765 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 APOA5Q6Q788 366 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.44□□□□□ -0.26
BRF1-207ENST00000546417 REXO1Q8N1G1 1221 aaKnown RBP13.44□□□□□ -0.26
BRF1-207ENST00000546417 SMG8Q8ND04 991 aaKnown RBP13.44□□□□□ -0.26
BRF1-207ENST00000546417 EXOC6Q8TAG9 804 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 LENG9Q96B70 501 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 GAD1Q99259 594 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 SH2D3AQ9BRG2 576 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 COL4A3BPQ9Y5P4 624 aa13.44□□□□□ -0.26
BRF1-207ENST00000546417 FASNP49327 2511 aaKnown RBP13.44□□□□□ -0.26
BRF1-207ENST00000546417 ESYT2A0FGR8 921 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 TMEM150BA6NC51 233 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 DDX11L8A8MPP1 907 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 MSH4O15457 936 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 CCL16O15467 120 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 STBD1O95210 358 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 C8AP07357 584 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 SCNN1GP51170 649 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 LIMK1P53667 647 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 RTN1Q16799 776 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 MIER3Q7Z3K6 550 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 NPAS3Q8IXF0 933 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 DNASE1L2Q92874 299 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 LRRC2Q9BYS8 371 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 NDRG2Q9UN36 371 aaKnown RBP13.43□□□□□ -0.26
BRF1-207ENST00000546417 IPPQ9Y573 584 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 FRYQ5TBA9 3013 aa13.43□□□□□ -0.26
BRF1-207ENST00000546417 PKD1L2Q7Z442 2459 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 F5P12259 2224 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 TADA2AO75478 443 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 ERLIN2O94905 339 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 POU2F2P09086 479 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 SRGAP2CP0DJJ0 459 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 GSPT1P15170 499 aaKnown RBP13.42□□□□□ -0.26
BRF1-207ENST00000546417 CXCL12P48061 93 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 UVSSAQ2YD98 709 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 PABPC1LQ4VXU2 614 aaKnown RBP13.42□□□□□ -0.26
BRF1-207ENST00000546417 TTC22Q5TAA0 569 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 PRSS55Q6UWB4 352 aaPredicted RBP13.42□□□□□ -0.26
BRF1-207ENST00000546417 EXOC8Q8IYI6 725 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 CCDC12Q8WUD4 166 aaPredicted RBP13.42□□□□□ -0.26
BRF1-207ENST00000546417 SLC7A3Q8WY07 619 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 SLC5A5Q92911 643 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 ZFP42Q96MM3 310 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 MINDY3Q9H8M7 445 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 MIOSQ9NXC5 875 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 GDE1Q9NZC3 331 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 GIT1Q9Y2X7 761 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 NOTCH4Q99466 2003 aa13.42□□□□□ -0.26
BRF1-207ENST00000546417 SF3B1O75533 1304 aaKnown RBP eCLIP13.41□□□□□ -0.265e-6■■■■■ 60.9
BRF1-207ENST00000546417 SHISA7A6NL88 538 aa13.41□□□□□ -0.26
BRF1-207ENST00000546417 ZBTB43O43298 467 aa13.41□□□□□ -0.26
BRF1-207ENST00000546417 HRO43593 1189 aa13.41□□□□□ -0.26
BRF1-207ENST00000546417 IGHDP01880 384 aa13.41□□□□□ -0.26
BRF1-207ENST00000546417 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
BRF1-207ENST00000546417 GNA11P29992 359 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms